Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02240 ATGTCAATCCTGTGCGGTGTGCCTCTTGTAGAGTGTGTGTACTGTCTGGCTTGTGCTCGTTGGGCTTGGAAAAGATGTATCTACACAGCAGGCCATGACAGTGAAACTTGGGGCCTTGCCACAGTAGAAGAATTTGAGCCTGTTCCTCGCCTTTGCCGATATATTTTAGCCGTGTATGAAGATGATATTCGACACCCTCTTTGGGCGCCTCCTGGTGGCTATGGAATCAACCCTGATTGGTTAATACTCAAGAAGACATACGAAGATACACAAGGGCGGGCCCCACCCTATACACTGTATCTTGATCATGATCATGCCGATATAGTTCTTGCCATTAGGGGACTAAATTTGGCTAAGGAGAGTGACTATGCAGTGCTGTTGGATAACAGATTGGGGAAGAGGAAGTTTGATGGGGGGTATGTTCACAATGGGCTGTTGAAGGCCGCTGGATGGGTTATGGATGCTGAATGTGAAATTTTGAGGGAATTGGTAGAGGAGTATCCAAACTATTCTCTGACTTTTACTGGACATTCCCTTGGATCAGGAGTGGCAGCAATGTTGAGCATGGTAGTGGTGCAAAATCACGATAAGCTTGGACATATTCAGAGGAAGAGGGTCAGGTGCTATGCTATTGCACCTGCTAGGTGTATGTCACTGAATTTGGCAGTCAGATATGCAGATGTAATCAACTCTGTTTTAACTACTCCTTTGCTTGATCAGGATGACTTCTTACCAAGGACAGCCACTCCATTGGAAGATATATTCAAGTCTCTTTTCTGTTTGCCATGCTTATTGTGCTTGAGGTGCCTGAAGGATACATGTATACCAGAGGAGAAGATGCTACAAGATCCGAGGAGACTCTATGCTCCTGGTCGGCTTTATCACATTGTTGAGAGAAAGCCTTTCAGAATGGGGAGGTTTCCCCCAGTTGTAAGGACAGCAGTTCCGGTAGATGGAAGGTTTGAACATATAGTCCTTTCTTGTAATGCTACATCTGATCATGCCATTATTTGGATAGAGAAAGAAGCCCAAAGGGCTCTAGATTTGATGAAGGAGAAAGATAACACATTGGAAATACCTACTAAGCAAATCATGGAGCGGCAAGAAACATTAGCTAGACACAGTCAAGAATACAATGCAGCATTACAAAGGGCTAAAACATTAGATGTTCCACATGCTTATACACCACCATCACAATATGGAACTTTTGATGAGGAGGGAGAGCAGAGTTCAAGAAGGATGAGCATGGCCACATTCTGCTTAAGAAATAATGTTGTGGCTCAAAGATGGAATAACATGAAGAGGAGAATGATAAATTTAGTAGAAATTGTTTCAGAACAGTTTCCACAACACAGTAGAAGCATATTGGCAGCATCCTAG 1380 0.4362 MSILCGVPLVECVYCLACARWAWKRCIYTAGHDSETWGLATVEEFEPVPRLCRYILAVYEDDIRHPLWAPPGGYGINPDWLILKKTYEDTQGRAPPYTLYLDHDHADIVLAIRGLNLAKESDYAVLLDNRLGKRKFDGGYVHNGLLKAAGWVMDAECEILRELVEEYPNYSLTFTGHSLGSGVAAMLSMVVVQNHDKLGHIQRKRVRCYAIAPARCMSLNLAVRYADVINSVLTTPLLDQDDFLPRTATPLEDIFKSLFCLPCLLCLRCLKDTCIPEEKMLQDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALDLMKEKDNTLEIPTKQIMERQETLARHSQEYNAALQRAKTLDVPHAYTPPSQYGTFDEEGEQSSRRMSMATFCLRNNVVAQRWNNMKRRMINLVEIVSEQFPQHSRSILAAS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02240 459 CDD Lipase_3 44 246 - -
Cca02g02240 459 Pfam Lipase (class 3) 109 248 IPR002921 GO:0006629
Cca02g02240 459 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 437 - -
Cca02g02240 459 Gene3D alpha/beta hydrolase 39 252 IPR029058 -
Cca02g02240 459 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Cca02g02240 459 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 437 - -
Cca02g02240 459 SUPERFAMILY alpha/beta-Hydrolases 41 274 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02240 Cca-Chr2 42912710 42915288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02240 1 405 Miscellaneous Gene Families AT3G49050 77.887 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02240 - - gmx:100800742 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02240 02 42912710 42915288 Cca02g02240 02 42912710 42915288 ECH