Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02228 ATGACACGATCCTTGGCAATGGCTTCTTCATCAATGTTATGTCCGAGGCTGGGGAATTGTGCAGTGTCACCATCCTCTTCTATTACTTCACATACAAAAATCCAATCTTTTCAGCTCTCTCCAATGTTCTCTCCACTGGGTCGAGGCCTTTTCTCACCTTGGAGTGGTTTAAAGCATCTGGGCATCTCAACTAGACCAAAGCCCCTTTTTCCCATAGATAGAAAGGGAGGGTGTAAGGGTAAAGTGGTTTATGCTTCTCTCTTTGGAGTTGGAGCCCCTGAAGCTCTGGTCATTGGGGTCGTTGCTTTGTTGGTTTTTGGTCCTAAAGGTCTTGCTGAGGTTGCTCGAAATCTGGGAAAAACATTGCGTACATTTCAACCCACCATTAGAGAGCTTCAGGATGTTTCAAGGGAATTTAAGAGTACACTTGAACGGGAGATTGGTCTTGATGACAATTTAAGTCCAACCCAGAATCCATACAATTCCAACAATCGCAATAGCACATCAACTTCATCATCCACTGTTGACCCAAATGGTACGCCGGATCCAATTAAAGCATACAGCTCTGAGGACTATCTTAAGATTACAGAGGAGCAACTTAAGGCATCTGCTGCACAACAGCAAGGGCAAACACCTCCTAAGGAAGGCGAGATTGAACCTCAAATCCAGCCTCCTGCTACTACTGTGCCTCCACCTCAGAAGCCAGAAAGTGAGAATTTGCCTCTGGATTCATAG 735 0.4531 MTRSLAMASSSMLCPRLGNCAVSPSSSITSHTKIQSFQLSPMFSPLGRGLFSPWSGLKHLGISTRPKPLFPIDRKGGCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPTIRELQDVSREFKSTLEREIGLDDNLSPTQNPYNSNNRNSTSTSSSTVDPNGTPDPIKAYSSEDYLKITEEQLKASAAQQQGQTPPKEGEIEPQIQPPATTVPPPQKPESENLPLDS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02228 244 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 8 238 - -
Cca02g02228 244 Pfam mttA/Hcf106 family 90 140 IPR003369 GO:0015031
Cca02g02228 244 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 89 134 IPR006312 GO:0016021|GO:0043953
Cca02g02228 244 MobiDBLite consensus disorder prediction 200 214 - -
Cca02g02228 244 Gene3D - 87 135 - -
Cca02g02228 244 MobiDBLite consensus disorder prediction 151 179 - -
Cca02g02228 244 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 8 238 - -
Cca02g02228 244 MobiDBLite consensus disorder prediction 146 244 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02228 - - ccaj:109806043 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02228 02 42803774 42808776 Cca02g02228 02 42803774 42808776 ECH