Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02222 ATGATGGATTCAGAGACTGGTGGAGGTTGTTCTCCGACGGTGCAAATGGGAATATGGTGGTTCTCAGTGTTGATCTTTGTTGGGTATGTAATGGTTTGGATTATGATGCCTACAAACACCTTCTTTCTTCATTGGTTACCGCACATTCATGCAGAGACAGATTCAATATACTTCGGCAAACAAGGGACATTCATACTGGTTTACACATTCCCAATTTTATTAATAGCCACTTTGGCCAGTCTATACTTTCATTTGGAGCAAAAGCGCTCTAATCGTCATAATACTAAAAAAAGGGAGGGACTCTTAGGATTGGCATCATGGAAAAGACCATTGCTTGTAAATGGTCCTCTTGGGATAATCTATATGACAGAACTCTCTTTCATTATCATGTTTGTTTTACTATTAATTTGGTCCTTGTGCTCCTACTTACTTGACATGTTTGGTAGCGTGGCACTAGAGGCAGCTAACCAGAGAGTGCAAGTGTGGGAAGCCAAGTTGGAATGTTCAGCCCTTGCTTTAGGCCTTGTTGGGAATATTTGCTTAGCTTTATTGTTCTTTCCTGTCTCAAGAGGTTCTTCAATTTTGAGGTTCATTGGCCTAACATCAGAGGGAAGCATCAAGTATCATATCTGGCTAGGACACATTGCAATGGCCCTCTTCACAGCTCATGGTCTAGGTTATATTATCTTTTGGGACAAGACACATCAAATCTCAGAGATATTGAAATGGAACAAAGTTGGCATCTCAAATGTAGCTGGAGCAGTTGCTCTACTTGCTGGCTTAATCATGTGGGCTGCTACCTTACCTTACATAAGGCGAAAAGCTTTTGAGCTTTTCTTCTACACTCATTACCTTTACATTGTCTTTGTAGTCTTCTTTGTTCTACATGTGGGATTTTCCTCTGCATGCATAGTGCTTCCAGGATTTTACCTATTCATGATTGACCGATACCTGAGATTCCTTCAGTCCCAGCAGAAAATTAGGTTGCTTTCTGCCCGTGTTTTGCCCTGTGAAGCTGTTGAACTTAATTTCTCCAAGAACCTAGGACTGTGCTATGCTCCTACAAGTATCATTTTCATAAATGTTCCTAGTATCTCCAAGTTGCAGTGGCACCCTTTTACAGTCACCTCCTGCAGTAATACTGATTCTGATACCTTAAGCATTGTCATCAAAAGTTCAGGAACTTGGTCCCATTCTTTGTACCAGAAGCTATCATCTTCATCTCCAATATCCCACCTTGATGTCTCCATTGAAGGGCCCTATGGACCGGCTTCAACCTTTTATTCAAGGCATGAAATGCTAGTGCTGGTGAGCGGAGGTAGTGGTATTACTCCTTTCATTTCCATAATCCGTTCGTTACTCTTTAAGGCCAAATCTGAAGAGGGCAAAATTCCTAAAGTTCTTCTTATATGTGCCTTCAAGAAGTCCATTGATCTCACCATGATAGACCTCATCCTCCCAGTTTCAGCCACAGCCTTTGATATCTCAAGTCTTCAGCTTCAGATTGAAGCTTATGTAACCAGGGAGAAACAGCCAGACATGAATGACAGAAAGTTTATTCAAACATTATGGTTCAAATCAAATGCATTAGATGAACCAGTTTCTGCAGTCTTAGGACAAAACAGTTGGCTCTATCTTGGCATTATCATCTCATCCTCTTTTATTTTATTCCTTCTACTTATTGCCATCCTAACTAAATATTACATATATCCAATTGACCATAATTCAGACCTGATATACCCTTATTTCTCAAGGTCCAGTTTAAGCATGTTATTCATGTGTGTATCTATAGCCATTGTAGCAACAACTGCTTTCTTATGGAACAAGAAACAGAATAAGGATTTGGAGCAGATTAAAAACATCTACACATCAAATCCATCAGCTTCTCCGGGTTCAGGATACCAAAATGCTGACAAAGAATTAGGAAATCTTCCCCTCCAATCCCTTGTCCAAACAGCTAAAGTACATTATGGAGAAAGACCTGACATAAAAAAAATACTCTCTGGCTGTGTTGCATCAAACATTGGAGTTCTTGTTAGTGGCCCAAGAAAAATGAGACATGAAGTAGCATCAATCTGTACTTCTTGCTCGACGGATGACCTACATTTCGAGTCCATTAGTTTCAGCTGGTGA 2133 0.4023 MMDSETGGGCSPTVQMGIWWFSVLIFVGYVMVWIMMPTNTFFLHWLPHIHAETDSIYFGKQGTFILVYTFPILLIATLASLYFHLEQKRSNRHNTKKREGLLGLASWKRPLLVNGPLGIIYMTELSFIIMFVLLLIWSLCSYLLDMFGSVALEAANQRVQVWEAKLECSALALGLVGNICLALLFFPVSRGSSILRFIGLTSEGSIKYHIWLGHIAMALFTAHGLGYIIFWDKTHQISEILKWNKVGISNVAGAVALLAGLIMWAATLPYIRRKAFELFFYTHYLYIVFVVFFVLHVGFSSACIVLPGFYLFMIDRYLRFLQSQQKIRLLSARVLPCEAVELNFSKNLGLCYAPTSIIFINVPSISKLQWHPFTVTSCSNTDSDTLSIVIKSSGTWSHSLYQKLSSSSPISHLDVSIEGPYGPASTFYSRHEMLVLVSGGSGITPFISIIRSLLFKAKSEEGKIPKVLLICAFKKSIDLTMIDLILPVSATAFDISSLQLQIEAYVTREKQPDMNDRKFIQTLWFKSNALDEPVSAVLGQNSWLYLGIIISSSFILFLLLIAILTKYYIYPIDHNSDLIYPYFSRSSLSMLFMCVSIAIVATTAFLWNKKQNKDLEQIKNIYTSNPSASPGSGYQNADKELGNLPLQSLVQTAKVHYGERPDIKKILSGCVASNIGVLVSGPRKMRHEVASICTSCSTDDLHFESISFSW 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02222 710 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 322 427 IPR017927 GO:0016491
Cca02g02222 710 Pfam Ferric reductase NAD binding domain 431 693 IPR013121 GO:0016491
Cca02g02222 710 Gene3D - 595 710 IPR039261 -
Cca02g02222 710 Gene3D - 415 541 IPR039261 -
Cca02g02222 710 Pfam Ferric reductase like transmembrane component 173 294 IPR013130 -
Cca02g02222 710 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 415 523 IPR039261 -
Cca02g02222 710 SFLD Ferric reductase subgroup (FRE) 16 710 - -
Cca02g02222 710 SFLD Ferric Reductase Domain 53 710 - -
Cca02g02222 710 CDD NOX_Duox_like_FAD_NADP 329 508 - -
Cca02g02222 710 Pfam FAD-binding domain 326 425 IPR013112 GO:0016491
Cca02g02222 710 PANTHER FERRIC REDUCTION OXIDASE 4-LIKE 13 709 - -
Cca02g02222 710 PANTHER NADPH OXIDASE 13 709 - -
Cca02g02222 710 SUPERFAMILY Riboflavin synthase domain-like 327 423 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02222 Cca-Chr2 42738960 42743100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02222 23 710 Miscellaneous Gene Families AT1G01580 52.730 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02222 K00521 - gmx:100779692 1176.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02222 02 42738960 42743100 Cca02g02222 02 42738960 42743100 ECH