Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02220 ATGGACCCTCACAAATTGACGCAATCGATGGCCGATCCAGCGGCTAGGAGGAGTCGCCGGAGGATCCAACCACTTCCATTGCCACCGCCAATTGCTTCTTCTTTATTTTGCTTCAATTTTGCTCCAAAATCCAACACTGTGTTAGATCTCCCCACTCTTTTCTCTATGCCATTCCCCCAGCTGGGAAGGGTGTACCGGAATCAGAGTGTAGCTGTGGGGTGTGGGATTATTAGGAGTCTTGTAGACCTGTTGGATTTTTCAGGATGGGAAAGTGCAAGGGTTGTGGGAAGGCAACATGTGAGGAAGGCTAAGAAGAAGCAGGTGAAAGATGAGTTGGATCGTCTGAAACAGGCTGAAAAGAAAAAGAGGCGCTTGGAGAAAGCTCTGGCTACTTCTGCTGCCATCATTTCTGAACTGGAGAAAAAGAAGCAGAAAAAGAAAGAGGAGCAACAGAGACTTGATGAAGAGGGTGCCGCAATTGCTGAAGCGGTGGCTCTGCACGTTCTACTTGGCGAAGACTCGGACGAATCTTGTAAGGTTGTTATAAATGACAGTGGATGCAAGACCTGGAATTATAATCACCAGCTTGACCTCTTCATGGGTGGGAGAAGAGCTTGTTTTCCTCATCTAGATGGTGGCACATGGTCTGTCTCTGCTGAAAATGGCAAGTGGTCTTTCAGATCTGAGCCTCTCGAAAAGAATGTGTATGAACCCTTATATGAAGAAGCAGAATGGGGTCCTGCTGGATTCTCTGTTGATCTTATAGCAGCACAAGCAGTTAGATCACTTCAGATTGCAGAAGATGCTGATGAGGCAATTGTGGCTCCGCCACCACCCTTGAGTTCGGTTTTTGTTCCTAATTTCAATGTGACTCCGATTTTGGATTCAGATTTCAGTTATGGGGAGAGGAGTAAAAGGGTTTCGAATGGTGATTATTCTGGTTTGCAACCGGTTATGGTGTCTTCAGTTATTGTGGATTTGAATAGGTCGCCTTTCAAGGGGAATGATAGCTCTATTTCAAGGAAGAACAAGGTGAGTATGCAGAAGATTGTTGATGGTAGTTCTTCCCGGCCTTCTGCCAGGGAGGTTGATGATTCTCGCGGGAAAAAGAAGGTGCTGAATTCAGTTAAAGCTGACAATGTTTCTTCAGGTAAATCGGCCCCGATGGTTGTCAAGAAGAAGAAAATTGTTAAGAGAATTGTGAAGAAAGGAACTACAAATTCTAAGTCATTTGTGCTGAAATCGGTACTAGCTAATAGGCTGCCACAAACTGTTGAAGCAGAGAGTGTAGTAATCAGTTCTGCAACTGCCCCTGTTCCGGAGAAAATTGAAGCTAATTTGGATGAGAAAAACAACATTGTTGACAATGTGGTTAGTTAA 1380 0.4478 MDPHKLTQSMADPAARRSRRRIQPLPLPPPIASSLFCFNFAPKSNTVLDLPTLFSMPFPQLGRVYRNQSVAVGCGIIRSLVDLLDFSGWESARVVGRQHVRKAKKKQVKDELDRLKQAEKKKRRLEKALATSAAIISELEKKKQKKKEEQQRLDEEGAAIAEAVALHVLLGEDSDESCKVVINDSGCKTWNYNHQLDLFMGGRRACFPHLDGGTWSVSAENGKWSFRSEPLEKNVYEPLYEEAEWGPAGFSVDLIAAQAVRSLQIAEDADEAIVAPPPPLSSVFVPNFNVTPILDSDFSYGERSKRVSNGDYSGLQPVMVSSVIVDLNRSPFKGNDSSISRKNKVSMQKIVDGSSSRPSAREVDDSRGKKKVLNSVKADNVSSGKSAPMVVKKKKIVKRIVKKGTTNSKSFVLKSVLANRLPQTVEAESVVISSATAPVPEKIEANLDEKNNIVDNVVS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02220 459 Coils Coil 101 159 - -
Cca02g02220 459 MobiDBLite consensus disorder prediction 1 24 - -
Cca02g02220 459 PANTHER OS02G0104200 PROTEIN 97 272 - -
Cca02g02220 459 MobiDBLite consensus disorder prediction 346 371 - -
Cca02g02220 459 PANTHER OS02G0104200 PROTEIN 97 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02220 Cca-Chr2 42717273 42724127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02220 - - gmx:100802248 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02220 02 42717273 42724127 Cca02g02220 02 42717273 42724127 ECH