Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02200 ATGGAAACTTCCCAACCTCTTTCTATTGAAAGCTTCTCATACAGTTGGTTAGTGAACCTGAGGCCATCACTAGAAAGCCTAGATAACTCCCTAAGAACTTCCCTTGATGCATCTGATGAAGCTTCCTTCATTGAGATGGACCCAAGAATGACACCCTCTAAAAGATTCTTTATGAACTCACAGGACTCCAAATTTGACTTCCCAATTTCACAGTCCCCTCTCAATCTTGTCCATGCAGATGAGCTCTTTTCCAATGGCTACCTCATGCCACTTTTTGTTGAATCATTGCAAATGGAAGAGTATGAGTCCTCAGACTCCAACACAAGCCTAGTATCATCTTCACATGCACCAAAGAGTGAGGCTCCTACAGGCCCTTCTAGATGCCTTTCCTTGAAAAGGTGCAGAACATTGTCAAGGAGAGTATTTCATAAGTACATGGATTTCTTGAGGCCTTTGTATAGAAGGCTGAGGGGTCACAAATCAAGTACTGAAAGTGTTGCTAAAAGGGCTGAGGCTGTGAAGAATAGGAGATACTATTCAGACACATCACCCCGGATTAGTGTAGCCTTTTCTGCTGATGATTGGCGCTACTCTTGTGATTCTGAAAGCTCAATATACGAGGCAGTTCTTCATTGCAAAAGATCCATTGGAAATGAGAGAATGAGTTAA 669 0.4245 METSQPLSIESFSYSWLVNLRPSLESLDNSLRTSLDASDEASFIEMDPRMTPSKRFFMNSQDSKFDFPISQSPLNLVHADELFSNGYLMPLFVESLQMEEYESSDSNTSLVSSSHAPKSEAPTGPSRCLSLKRCRTLSRRVFHKYMDFLRPLYRRLRGHKSSTESVAKRAEAVKNRRYYSDTSPRISVAFSADDWRYSCDSESSIYEAVLHCKRSIGNERMS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02200 222 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 6-RELATED 1 217 IPR044699 -
Cca02g02200 222 PANTHER KINASE REGULATOR-LIKE PROTEIN, PUTATIVE-RELATED 1 217 - -
Cca02g02200 222 MobiDBLite consensus disorder prediction 104 125 - -
Cca02g02200 222 MobiDBLite consensus disorder prediction 104 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02200 Cca-Chr2 42503627 42504770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02200 - - gmx:100807566 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02200 02 42503627 42504770 Cca08g00755 08 14798889 14800675 ECH
Cca02g02200 02 42503627 42504770 Cca02g02200 02 42503627 42504770 ECH
Cca08g00755 08 14798889 14800675 Cca02g02200 02 42503627 42504770 PCT