Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02190 ATGGACACCGAAGGCTTATCCCTAATCTGCGCCGGCCTCGGAACCGAAGAACAGGACCTTGAAGGCAACCGAATTGGTTATACCAAAGGCGAATACTGTCTCGATAACCTGAAAGACTTGCTGAGGTTTCTGCGGCGTGACGATCCCCAAACGCGCGACGTCTTCAAGCAAGTTTGCAAGTGGAACACCGTTTCCAAGGACTTGATTCCTATCATCGAGTACTACCACGAGGATCGTAACTTGCTTCTGAATGCAGTTAAGGTTCTGGTGTTCCTGACGATGCCTATCGAGCCTTCTTCGACGGATATACCTCAGCAGTTGGAGTATCTGTGGGGTTTGAAGTCTGCAGTGACGAACAGTGATGTTGCTGCAGTCATAGTGTCGTTTCTGGAAAAACCGCTTGAGAATTTGGAACGTAATGCATTCAGTGAGGAAGACTGGAAATTGGTACAGCTAGTGCTTACGTTATTTAGGAATATCTTAGCTGTTCAAGAGATTCCGTTGCACCAGAAGTCAGGGGGACTTGCTACTCAGTTTTTGTCGTTGAGAGACCGATTTCTGGAACTTTTGTTTCGCGAGAATGTAATGGATATAATCCTGGTTATATCTCAATATGTTGGTGGTTCGAATGTTTATCTCCGTCAGGATAACTTGCTTCTACTGGAAATTTTCCATTACATTTTTGTGGGTCAGGACCCGGAGCTAATTATTAGGGCACATTCAAAGGGATCAAAGGCGGATGAAGACCCCCAGACTTCTCTAAATAGTCTCCAGTCCATTATGGAGGAGGAAAAGAAGAGAAGAAATATTTGTAAGCTCAGCAATATATGTCGACATTCTCAATTTAGTGGAACATTTGCTCGGTTTACCATGGATGGTTCTAAGGCAGTATTTAAGGGAAATCCTAATTCTTCTCATAATGTGCTGCTTAAAGCACAAAATGTCACTCGGGGTCCAACCAAAAGAATTGCGTGGGATCATCCAAGGTTGCCTTCAACAAAAGATAATATATTGGAGTTGCTTCAGGGATTTGTGAATCAGTTTCTTTCTGGGGGATACAATGTTTTGATGCGATCCATTCGTGAAGATATTGAAAAGGAACATCCGTCAATTCAAAAAAGTGATGTTGTTGTTTTCTTTCAAGTGGCTGAATTTGTCACCTCATTTCAGTTTTACAAGTATTCAGCTTCTAAGACCAAGGAGGGAGGGGACACCTTTGAGACATTTGGTGATAAAGATGCAGATACATCAGATTTCAGTGGTCAAATATGTGGCCCAATTGCAGCATCCTTGAATGAGTCAATGTTCCAATTGGTCATTTCAAAGTGGCGGCATGCCTATGATGGTCTAAAGGAAACAAATGACTACGGGTTTCTATCTGCAGCTGGTTCTCTTTTGAAAAACATGATCCGTATGCTGGATTTGATACTTAAATTGTTGCCTGAAGACTCAAAGGAGCCACAAACAGCTCGCATCCTTCTGTACAAGTTATTTTATGATCAGACAGAGGAAGGGATGACTCAGTTCCTATTGAATTTGATGAAAACCTTTGACACCCACAAGCAACCCAAAAGTGATCTTGCAGATTTGGTAGAAATGATTCACAAGGTTGTTGAGCTGATGGATATTCTTCAGTCTCGAGGAGCATTGAGGGTGTCTAAAAAATCAAGGAAAGTAAAAAAAAAGAAACTTCCAGAAGGAGTAGAGTCAGGAGACAAACCAACTGGAGATCATTCTTCCATTCAAAATGAAACTGGCATCTCAACTGAATCCCTACAAAATGCAGGAATGCCTACCACTGGGGATAATGTTGGCCCTGATGATAACGAACATGAAAATCATGCTGAGGAAGATGGGAACTCTCAAGTTGGTTTGGAACCAATGGAAGCCACAAATTATGAACATGTTAATGAGGATATGTTGGATGGCACTAATGATTTTTCTGAAGATGAGCAGCTAAATGCAATTAATGAAGTTGATTTCAAAGTTTCAACGGTGGTCTCTGCCTTTGCGAATCACAATATCATTCAGAAATTATGTTGGTTGCTCAAGTTTTACAAGAGCAATTCCCTTGCTACAAATCATTACATAATAAGCATGCTGCAGAGAATAAGTGATGACCTTGAACTCCATCCTATGCTTTACCAGTTGTCACTGCTCACAACTTTTTATGACATCCTTGTTGAACAAAAGTCATGTCCCTGCAAGGAATATGCAAGTATAGTTGATTTCCTGACTTGTTTGGTCAGAAAGATGCTAAAGAAAATGAAAAAGCAGCCCCTCTTGTTTGTGGAAGTCCTTTTCTGGAAGACTCGACGGGAATGCCATTACATCAATGCTGAATATATGTTGAGTGAGCTTGGCCATTTGAAGAAAGAAAGTATGAATTGGAATAGCACTCAAGGAGAAGAAGAAATTGGTTCATCCCCAGCTAGGGCGTGGACTCGTAGAAGCATAGCTGATGCACTTGGTGATGACGAAGCTGATATTATAATTACTCATGGCTCAGGATACAAGCTTGATGATGTTGAAGGCTTTGCATCTACCTCTGGCAGTGACAGTGGCAAAGATGACCATAATGGGGAGCAATTGATGGAAGATGGATCTCAAATAGCTCCAAGGAAAAAGAAAAAACTTGTTCTTGATGGTGATTTGGAAAGACAAATTAAAAATCTCTACGAGAAATTCAAAGAAGACCAACAATGCAGTCGTCGTATAGCTGAAGTGCTAGATCCAGACGGTAAAATTTCACCAGCTCAAATTTCCAATATGTTAAAAAGATTAGGACTAACAGTTACACATAAGAAAAAGAAGGGTGATGGTGACGGACCTTTGTCTACTAGTAGTCCTAAACAATTAGATGGTGACGGAATAACACGAGAAACTAAAAAATCAGTGAATTCGGAGGGAAGCCTGTTGGTTCAGCCCCTGCAAAAAAAGAAAAGAGTTCGAGCTTTCAATGAAAACCAGGAAGCTTTAATCAAAGTTCTATATGAGCAATTCAAGGACCACAGAAGATGTAGTTACATGATAGCCAATGCACTGGATAAGGATGGTAAATTCACTTCTGCCCAAGTCTCTCGAAAACTTAAGCAGCTTGGTTTATCTATTCCCGGGAAGAAGAGTTCTGGAGGCAAAATGCACCCAAAAGGTGCAGATCTCATGGATGGTTCAATTGATAGAATGAATGAGTCTGATGATGAGACATTGATATCATTGGTAAAAAGGAAGAAAATGGAGAATAGCAAATTATTGCATGGACATACCAGTGGGGATAGATTGTCAACAGATGATTCTGATGATGAAATGCTCAGCTCTGTTCTCAGGAAAAAAATAAATAGCAAATCGTCTACTGAACAATTACCTGAACGCATCAGTAAGGATACATCGACAAGAGATAATTCTGATGATGAAATGCTCAGCTCTGCTCTCAAGGAAAATCGAGTTGGTTCCATGGATTCCTCCCAAGTAGAAGATCAGCAAATGGATGACTTGGCAGATTCAGAGGATGAAGTGGCTGTTAGTGCATTTCCTAACAATGCTGGATCCAGAAGGAAGCTGAGAATGGTGATTGATCCCGAGGACGATGACTGA 3594 0.4098 MDTEGLSLICAGLGTEEQDLEGNRIGYTKGEYCLDNLKDLLRFLRRDDPQTRDVFKQVCKWNTVSKDLIPIIEYYHEDRNLLLNAVKVLVFLTMPIEPSSTDIPQQLEYLWGLKSAVTNSDVAAVIVSFLEKPLENLERNAFSEEDWKLVQLVLTLFRNILAVQEIPLHQKSGGLATQFLSLRDRFLELLFRENVMDIILVISQYVGGSNVYLRQDNLLLLEIFHYIFVGQDPELIIRAHSKGSKADEDPQTSLNSLQSIMEEEKKRRNICKLSNICRHSQFSGTFARFTMDGSKAVFKGNPNSSHNVLLKAQNVTRGPTKRIAWDHPRLPSTKDNILELLQGFVNQFLSGGYNVLMRSIREDIEKEHPSIQKSDVVVFFQVAEFVTSFQFYKYSASKTKEGGDTFETFGDKDADTSDFSGQICGPIAASLNESMFQLVISKWRHAYDGLKETNDYGFLSAAGSLLKNMIRMLDLILKLLPEDSKEPQTARILLYKLFYDQTEEGMTQFLLNLMKTFDTHKQPKSDLADLVEMIHKVVELMDILQSRGALRVSKKSRKVKKKKLPEGVESGDKPTGDHSSIQNETGISTESLQNAGMPTTGDNVGPDDNEHENHAEEDGNSQVGLEPMEATNYEHVNEDMLDGTNDFSEDEQLNAINEVDFKVSTVVSAFANHNIIQKLCWLLKFYKSNSLATNHYIISMLQRISDDLELHPMLYQLSLLTTFYDILVEQKSCPCKEYASIVDFLTCLVRKMLKKMKKQPLLFVEVLFWKTRRECHYINAEYMLSELGHLKKESMNWNSTQGEEEIGSSPARAWTRRSIADALGDDEADIIITHGSGYKLDDVEGFASTSGSDSGKDDHNGEQLMEDGSQIAPRKKKKLVLDGDLERQIKNLYEKFKEDQQCSRRIAEVLDPDGKISPAQISNMLKRLGLTVTHKKKKGDGDGPLSTSSPKQLDGDGITRETKKSVNSEGSLLVQPLQKKKRVRAFNENQEALIKVLYEQFKDHRRCSYMIANALDKDGKFTSAQVSRKLKQLGLSIPGKKSSGGKMHPKGADLMDGSIDRMNESDDETLISLVKRKKMENSKLLHGHTSGDRLSTDDSDDEMLSSVLRKKINSKSSTEQLPERISKDTSTRDNSDDEMLSSALKENRVGSMDSSQVEDQQMDDLADSEDEVAVSAFPNNAGSRRKLRMVIDPEDDD 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02190 1197 MobiDBLite consensus disorder prediction 1112 1197 - -
Cca02g02190 1197 MobiDBLite consensus disorder prediction 1082 1101 - -
Cca02g02190 1197 PANTHER TIMEOUT/TIMELESS-2 1 1165 IPR044998 -
Cca02g02190 1197 MobiDBLite consensus disorder prediction 555 625 - -
Cca02g02190 1197 Pfam Timeless protein 27 287 IPR006906 -
Cca02g02190 1197 PANTHER PROTEIN TIMELESS HOMOLOG 1 1165 - -
Cca02g02190 1197 MobiDBLite consensus disorder prediction 1121 1143 - -
Cca02g02190 1197 MobiDBLite consensus disorder prediction 933 969 - -
Cca02g02190 1197 MobiDBLite consensus disorder prediction 575 600 - -
Cca02g02190 1197 MobiDBLite consensus disorder prediction 605 619 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02190 K03155 - gmx:100796385 1935.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02190 02 42425457 42434026 Cca02g02190 02 42425457 42434026 ECH