Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01706 ATGAATGACATGGCTTGGACTTCCCTCAAAGGTTCTCCTAGATTGTCTTCTCATCCAAGGCCTCTTTCTTGGATTGTAGTTTTGGTAGGAGCACTGGCAGTTTTCTTAATTTATGCTTCTTGGGTTCTTGTATCATCACCAGTTGGTGCCACGGTTCAGGGGTATTTTTATAGTGTAGGTAGTTCTGAGAAGTTAGATTTGCCTGTGTCTCCAGCAAATGAAGCTTCTGTTGATAGCCACTTGAATAAGAGTTTAGATCTTGTTGATAATAAATCTCCCTCTAATCAGCAACCTTCCACACTTGCCACGGAGGTGTCTAGTGATAATAAGGTAGAACAAACTGATGCTAAATCAAACTCACAAGTAGACTCAAGTGAGTCTATTTCGGCAAACCTGCCATTGACCAAGGAAGTGAATAGCGATCCTGAAGCTTCAAATTCAGGAGAACCAGCGTCTTCGTTAGGTGGCAGTGGAGATGTAGCCAATAGTAGCTTGTCTACTCAAGAAAATTCAAGACCTGATTTGAATTCAAGTGCAACTGTGCCATTGGCAGGTACCAATTCTTCCACCAAGACGGATAATATTAGAATGGAGGAACCCACTTCTGTGCCTTTGATCAATCAGACTAGTGCTGTAAGTACAGCATCAAATGATACCTCTATGTCTTCTGATGATTCCACACCAACTGCTGTCCCAGCATCAGTAGAGAAGCCGAATAACACATCCAATGCTGGCTGTGATCTGTACCATGGAAATTGGATTCATGATCCACTGGGACCATTATACACAAACAATACATGCCCTGTATTGACACAGATGCAGAATTGCCAGGGTAATGGAAGGCCTGACCAGGATTATGAAAATTGGCGATGGAAGCCCTTTCAGTGTGACCTCCCACGATTTGATCCCAAGAAATTTTTGGAGCTGATGAGAGGGAAGACCTTGGCTTTCATTGGGGATTCAGTAGCTCGAAACCAGATGGAATCAATGTTGTGTATTCTGTGGCAGGTAGAGGAACCAAAGAATCGGGGAAATCGTCATATGCAACGATATTATTTTAGGTCTGCCTCTGTTATGATTGTCAGGATATGGTCCTCATGGCTTGTCAAATTAACATCTGAACCATTTGATTATGCTCCAGCCGGTGTGGATAAGCTCCATCTTGATGCCCCTGATGAGAAGTTGATGGAACATATCCCAAACTTTGATGTGGTTGTTCTTTCTTCTGGTCATTGGTTTGCCAAGCAGTCTGTGTATATTTTGAACAATGAGATAGTGGGAGGACAGTTGTGGTGGCCGGACAAATCTCGGCAGATGAAGGTTGACAGCGTTAAAGCATACGGCATATCTGTTGAAACAATTCTTACTGCAATTGGTACAATTCCAAATTACACAGGCCTTACAATTGTGCGTTCCTACTCTCCTGACCATTATGAGGGTGGGGCATGGAACACCGGTGGATCATGCACTGGGAAGGTTAAGCCTCTTGCACTTGGTGAACTGGTGGAAAATGTACACACAAATATAATGCATGAGCAACAGGTCACAGGTTTTGACCGAGCAATGAAAAGAGTAACAAATAAATCAAAGTTGAGGCTAATGGATATCACTGAAGCCTTTCAATACAGGCATGATGGTCACCCTGGCCCTTATAGGAGCCCTGACCCTAATAAGATCACAAAACGTGGCCCTGATGGAAGGCCACCACCACAGGATTGCTTGCACTGGTGCATGCCTGGCCCTGTTGATACCTGGAATGAACTTGTGTTTGAAATCATTAGGAGAGAATATGAAGGTGGAAGGGCATCATGA 1812 0.4371 MNDMAWTSLKGSPRLSSHPRPLSWIVVLVGALAVFLIYASWVLVSSPVGATVQGYFYSVGSSEKLDLPVSPANEASVDSHLNKSLDLVDNKSPSNQQPSTLATEVSSDNKVEQTDAKSNSQVDSSESISANLPLTKEVNSDPEASNSGEPASSLGGSGDVANSSLSTQENSRPDLNSSATVPLAGTNSSTKTDNIRMEEPTSVPLINQTSAVSTASNDTSMSSDDSTPTAVPASVEKPNNTSNAGCDLYHGNWIHDPLGPLYTNNTCPVLTQMQNCQGNGRPDQDYENWRWKPFQCDLPRFDPKKFLELMRGKTLAFIGDSVARNQMESMLCILWQVEEPKNRGNRHMQRYYFRSASVMIVRIWSSWLVKLTSEPFDYAPAGVDKLHLDAPDEKLMEHIPNFDVVVLSSGHWFAKQSVYILNNEIVGGQLWWPDKSRQMKVDSVKAYGISVETILTAIGTIPNYTGLTIVRSYSPDHYEGGAWNTGGSCTGKVKPLALGELVENVHTNIMHEQQVTGFDRAMKRVTNKSKLRLMDITEAFQYRHDGHPGPYRSPDPNKITKRGPDGRPPPQDCLHWCMPGPVDTWNELVFEIIRREYEGGRAS 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01706 603 MobiDBLite consensus disorder prediction 543 572 - -
Cca02g01706 603 MobiDBLite consensus disorder prediction 85 239 - -
Cca02g01706 603 PANTHER PROTEIN YLS7 10 600 - -
Cca02g01706 603 Pfam PMR5 N terminal Domain 245 297 IPR025846 -
Cca02g01706 603 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 298 591 IPR026057 GO:0016740
Cca02g01706 603 MobiDBLite consensus disorder prediction 86 239 - -
Cca02g01706 603 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 600 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01706 Cca-Chr2 36023775 36029540 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01706 - - gmx:100788111 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01706 02 36023775 36029540 Cca02g01706 02 36023775 36029540 ECH