Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01692 ATGACAGGCTCAGCAGATGCATTAGTGATATCATTCGGTGAAATGCTCATCGACTTTGTTCCTGACACATCTGGTGTTTCCTTGGCTGAGTCTTATGCTTTTATCAAGGCCCCTGGAGGTGCCCCTGCCAATGTTGCTTGTGCCGTATCCAAACTTGGTGGTAACGCTGCCTTCATTGGCAAGGTGGGAGATGATGAATTTGGAAGGATGCTAGTTGACATTTTGAAGAAAAATGGGGTCAATACAGATGGTGTTTGCTTTGATGAGGAGGCAAGAACTGCATTGGCTTTTGTGACACTGAGGAAGGATGGAGAGAGGGAGTTCATGTTTTATAGAAATCCTAGTGCAGATATGTTGTTGAAGGAATCTGAATTGAATGTGGGTTTGATCAAGCAGGCCAAGGTATTCCATTATGGATCTATTAGCCTTATAACAGAGCCATGCAGATCAGCTCACTTGGCTGCGATGAAAGCTGCTAGAGAAGGTGGTGCTTTGCTGTCCTATGATCCGAATGTGAGGCTGCCTTTGTGGCCTTCTCATGAGGCTGCTAGGTCTGGGATCAAGAGCATTTGGTATGAAGCTGACTTCATCAAGGTGAGTGATGACGAAGTTCAATTTCTGACACAAGAAGATCCTGAGAAGGAAGATGTTGTCATGTCCCTGTGGCACGACAAATTGAAAATGCTTCTTGTCACTGATGGAGAGAAGGGTTGCAGATATCTTACCAAGAACTTCAAAGGAAGGGTAACTGGATTCTCAGTGAAGGCAGTTGACACAACTGGTGCTGGTGATTCTTTTGTTGGTGCACTCCTCACAGCTGTGGCAAGGGACAGTTCCATATTTGATGACGAACCAAAATTGAGAGAGGCTTTGACGTTTGCAAATGCTTGTGGAGCAATGTGTACAACACAGAAGGGAGCAATTCCTGCACTTCCAACCGCTGCAGACGCTGAGAAATTTGTTTCCAACTCAAAAGCCCAATAA 984 0.4522 MTGSADALVISFGEMLIDFVPDTSGVSLAESYAFIKAPGGAPANVACAVSKLGGNAAFIGKVGDDEFGRMLVDILKKNGVNTDGVCFDEEARTALAFVTLRKDGEREFMFYRNPSADMLLKESELNVGLIKQAKVFHYGSISLITEPCRSAHLAAMKAAREGGALLSYDPNVRLPLWPSHEAARSGIKSIWYEADFIKVSDDEVQFLTQEDPEKEDVVMSLWHDKLKMLLVTDGEKGCRYLTKNFKGRVTGFSVKAVDTTGAGDSFVGALLTAVARDSSIFDDEPKLREALTFANACGAMCTTQKGAIPALPTAADAEKFVSNSKAQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01692 327 PANTHER FRUCTOKINASE-5-RELATED 4 324 - -
Cca02g01692 327 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 258 271 IPR002173 GO:0016773
Cca02g01692 327 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016773
Cca02g01692 327 SUPERFAMILY Ribokinase-like 9 320 IPR029056 -
Cca02g01692 327 PANTHER HEXOKINASE FAMILY MEMBER 4 324 - -
Cca02g01692 327 Gene3D - 5 327 IPR029056 -
Cca02g01692 327 Pfam pfkB family carbohydrate kinase 8 313 IPR011611 -
Cca02g01692 327 CDD bac_FRK 8 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01692 Cca-Chr2 35884783 35887260 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01692 K00847 - gmx:100791294 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01692 02 35884783 35887260 Cca02g01692 02 35884783 35887260 ECH