Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01685 ATGGCATTGAAGGAGACATTTTACTTATCACATGGATCACCATCACTTGCCATAGATGATTCAATTCCAGCATGGAGCTTCTTCAAATCGTGGAAGGAGGTGTTTCCTCAGAAACCCTCTTCCATTCTCGTCATCTCCGGTCACTGGGACACCGCTGTTCCCACCGTCAACGTTGTTCATCATAACGACACCATCTATGACTTCTACGGTTTCCCCAAAGTCATGTACAAGCTGAAGTATCCAGCACCAGGGGCTCCACACGTGGCAACGAGGGTGAAGGAACTACTACAAGCATCAGGCTTCACTCGTGTGGATGAAGATAGAAAACGTGGGCTAGACCATGGTGCATGGGTGCCTCTGATGTTGATGTATCCAGAGGCAGATATCCCAGTGTGTCAACTCTCAGTTTCATCACACAGAGATGGCACTTACCACTATAACATGGGAAAGGCATTGGCTCCTCTTAAGGATGAGGGTGTTCTTATAATTGGCTCAGGGAGTGCTGTCCATAACTTGAGAGCAATTGGGCCTCGCAATAGCCCTGCTGCTCCATGGGCTGTGGCATTTGATTCCTGGCTGAAAAACTCTCTCATTGATGGAAGGTATGAGGAAGTAAATCAATTCGAAGAGAAGGCCCCATATGCAAAGTTGGCTCATCCATGGCCTGATCACTTCTTCCCATTGCATGTGGCTATGGGGGCAGCTGGTGAAAACTCAAAGGCCAAACTTGTCCATGATAGTTGGGATGGTGGTTCTATTTCTTATGCCTCGTTTGGTTTCACAGCAGCTACTAGTTGA 798 0.4762 MALKETFYLSHGSPSLAIDDSIPAWSFFKSWKEVFPQKPSSILVISGHWDTAVPTVNVVHHNDTIYDFYGFPKVMYKLKYPAPGAPHVATRVKELLQASGFTRVDEDRKRGLDHGAWVPLMLMYPEADIPVCQLSVSSHRDGTYHYNMGKALAPLKDEGVLIIGSGSAVHNLRAIGPRNSPAAPWAVAFDSWLKNSLIDGRYEEVNQFEEKAPYAKLAHPWPDHFFPLHVAMGAAGENSKAKLVHDSWDGGSISYASFGFTAATS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01685 265 PIRSF Doxgns_DODA 1 262 IPR014436 GO:0008270|GO:0016701
Cca02g01685 265 CDD 45_DOPA_Dioxygenase 6 260 IPR014436 GO:0008270|GO:0016701
Cca02g01685 265 Gene3D - 2 261 - -
Cca02g01685 265 PANTHER AROMATIC RING-OPENING DIOXYGENASE, CATALYTIC PROTEIN 1 265 - -
Cca02g01685 265 PANTHER UNCHARACTERIZED 1 265 - -
Cca02g01685 265 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 260 IPR004183 GO:0006725|GO:0008198|GO:0016491
Cca02g01685 265 SUPERFAMILY LigB-like 6 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01685 Cca-Chr2 35809289 35812261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01685 K15777 - gmx:100810694 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01685 02 35809289 35812261 Cca02g01685 02 35809289 35812261 ECH