Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01377 ATGGGTGGTAACAGGCAAAGGAAATCTTCCTCTTTCAAGTCTATTTTCAACATTTTCAAATCTAACAATAGGCAAAGAGGAGGGCAACATGATGCTAATTATGATGATGGGCCAAAGCAGTGGACCAAAGTCTGGCCCAGTGATGAGGACAGAGGTCGCTGGGGGGTAGCTGATCCTGTCATTGATATCAGAGCCACAGCTTTCATTGCTCAATACAAGAAACGGGTTTCCGAGTCTGAAATTCACTGTCAAGCTCAAGTCCACCAGTAG 270 0.4519 MGGNRQRKSSSFKSIFNIFKSNNRQRGGQHDANYDDGPKQWTKVWPSDEDRGRWGVADPVIDIRATAFIAQYKKRVSESEIHCQAQVHQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01377 89 MobiDBLite consensus disorder prediction 1 40 - -
Cca02g01377 89 PANTHER OS06G0632400 PROTEIN 1 86 - -
Cca02g01377 89 PANTHER RIBOSOMAL PROTEIN S12 1 86 - -
Cca02g01377 89 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01377 Cca-Chr2 32266329 32266901 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01377 - - mtr:MTR_1g084830 119.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02685 03 48128653 48129380 Cca02g01377 02 32266329 32266901 PCT