Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01257 ATGGAGGGCATCACCGCCACTGTCTGCAGGGGTGTAAAAAAGTACTGGAGGAGAAGAGGCTACGAGAGGCTTAACGGGCCCACCCGGAGAAGGAGGAACCGGGTGGAGCTCGGAAGCGCCCGAACCGGTAAGGCCCGCTTCTGGAGGTGGAGGATCAGGCTCGCACCCAAGATCCGAATCAGAAAAATCCCCTCCCCAAAGAAGGCCCTGTTATGGGTGCGTGACGCCTACGTCAGGATGATGCTGGGCCTCGCCAACTCCCGCGTCATGACGGTCACTGCCTCCTCAGCTTCGGCCTTCGGCGGTGCCCTCTCAGCCGCCGACACCTCCTTCGCTGCCTTCACCCGGGCCCCACCCAAGGAGTACGACGACAAGATGATCATCCAGATCTACAACTCCCTCCTCATGGCCCATCATGGACCCTTGGTTCCCTCCGACGCTGCAACACAAGTCGCTTGCCCACGGTAA 468 0.609 MEGITATVCRGVKKYWRRRGYERLNGPTRRRRNRVELGSARTGKARFWRWRIRLAPKIRIRKIPSPKKALLWVRDAYVRMMLGLANSRVMTVTASSASAFGGALSAADTSFAAFTRAPPKEYDDKMIIQIYNSLLMAHHGPLVPSDAATQVACPR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01257 155 PANTHER BNAA09G40010D PROTEIN 1 148 - -
Cca02g01257 155 PANTHER BNAA09G40010D PROTEIN 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01257 Cca-Chr2 30598601 30599677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01257 - - gmx:100798623 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g01257 02 30598601 30599677 Cca02g01257 02 30598601 30599677 ECH
Cca03g02793 03 49305616 49306237 Cca02g01257 02 30598601 30599677 PCT