Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g01139 ATGTCTTACTCAAGTGTCTGTCAAGGGTTGCAATCAAGTGTCGTGGAACCACGTGTCTTGAAGCTCAAGTTGACTCCACCAAACGATGAACACCAAAACAAAAACTGGAGTTTCCTTCAATCTCTCTCCAACATTTCTCATTGCAAGGAGCACCACACCGATAATGTCTACGTCCACCCTTTGGTTAAACGCTCCTCCTCCACGCTCAGCGCAAAGAGCTTGGAACTATGCACCGAAAGCTTAGGCTGCGAAACTGGTAGCAATGCCAGCGATAACACCCATGACGTGTCTGTATTTTCACTCCAAACTAATTTAAGGAGCAACAACACTCCACTAGTTAACAAAAATTCTGCCTCTAAAAGATTTAACCGCGCCTCCACCTTCCCACCACCCTTGACTTCAATGGGAGGGATCAAAGTTAGGTCTCATCGTGAAGATGGAAGGCTTGTCTTGGAAGCTGTTGCTTCCTCTTCCCCTGAACCCTACTTTGAAGCTGAACGTGCCAATGGAAGGCTTAGGCTTCGGCTTTTTGAGAGCGTGGAAACTTGTTATGGTGATGATGAAGGAGAAACTGAAACATTGAACAATGAAGCGTGTGGTGAAGAAGAGGGCGAGCTGGAAGAGTACGTTGGTTATGGTGAGGATGAGATGGGTGTGAAGAAGTTTGTGCGACCAAGCAGGTGCAAGGAAAGTGGGAACAGAGTCATTTTTGGAGAAGGATACTTTGACCACGCTCCTCTTTCTCTCTGTCTCTGA 756 0.4669 MSYSSVCQGLQSSVVEPRVLKLKLTPPNDEHQNKNWSFLQSLSNISHCKEHHTDNVYVHPLVKRSSSTLSAKSLELCTESLGCETGSNASDNTHDVSVFSLQTNLRSNNTPLVNKNSASKRFNRASTFPPPLTSMGGIKVRSHREDGRLVLEAVASSSPEPYFEAERANGRLRLRLFESVETCYGDDEGETETLNNEACGEEEGELEEYVGYGEDEMGVKKFVRPSRCKESGNRVIFGEGYFDHAPLSLCL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g01139 251 Pfam Fantastic Four meristem regulator 128 176 IPR046431 -
Cca02g01139 251 PANTHER DUF3049 FAMILY PROTEIN 1 233 - -
Cca02g01139 251 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 1 233 IPR021410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g01139 Cca-Chr2 28757770 28758760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g01139 - - gmx:102661814 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02107 03 41401644 41402789 Cca02g01139 02 28757770 28758760 PCT