Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02462 ATGGTCTACGACCGCCTGGCTGAGGCCGTCAAGACCAAGCTCCGCCGGCTCGAGAACCCGGACTCACGCTTCCTCAAGCACGGGTCCCCGGTTCCCACGCTGGTGGACCACACGCGGGTCCTGGGCGCGCCCGAGACCCGGGTGACGACTCTCCCCAACGGCCTCCGCGTGGCGACGGAGTCCTCCCTGGCCTCGAAAACCGCGACCGTGGGCGTGTGGATCGACGCCGGGTCGCGGTTCGAGACGGAGGAGACGAACGGCACCGCGCACTTCCTGGAGCACATGATCTTCAAGGGGACGGCGAAGCGGACCGTGAGGGAGCTCGAGGAAGAGATCGAGAACATGGGAGGGCACCTGAACGCGTACACGTCAAGGGAGCAGACAACGTATTACGCTAAGGTTACGGACAAGGATGTTCCCAAGGCGCTCGATATTTTGGCTGATATATTGCAGAATTCCAAGTTTGATGAGAATAGGATTAGCCGCGAGCGTGATGTCATTCTTAGGGAAATGGAGGAGGTTGAGGGACAAATGGAAGAAGTAATTTTTGACCATTTACATGCAACTGCTTTCCAGTACACCCCACTTGGTAGAACAATTCTTGGACCGACACAGAATATTAAGACAATCACTAAAGATCATCTGCAAAACTACATTCAGACACACTACACAGCTCCTAGGATGGTAGTTGCTGCATCTGGAGCTGTCAAGCATGAAGATATTGTTGAGCAAGTAAAAACATTGTTTACAAAGTTGTCAATAGTTCCCACCACAGCTTCTCAGTTAGTTGCAAAAGAACCAGCCATTTTCACTGTAAAATTTAATGACTATTTTACTGTGCTACAAAAACAGGTTAGAATTTTGGATGATGATATTCCCCTTGCACAATTTGCTGTAGCTTTTGAAGGTGCTGCTTGGACAGATCCTGATTCCATTGCTCTGATGGTCATGCAAGCTATGTTGGGTTCTTGGAACAATTCTGAGTTGGCACAACGAGTTGGCATTAATGAAGTTGCAGAAAGCATGATGGCCTTCAATACCAATTACAAGGATACAGGTCTTTTCGGTGTTTATGCTGTTGCTAAGAAAGATTCCTTGGATGACTTATCCTATGCAATAATGCACGAGACAACCAAGTTAGCTTATCGGGTTTCAGAAGATGATGTTACCCGAGCTCGTAATCAGCTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAGATATTGGGCGTCAGCTACTCACCTACGGCAGAAGAATACCATTTGCAGAATTATTTGCTAGAATTGATGCCGTTGATGCCAGCACAATAAAACGTGTTGCTAACCGATTTATCTATGACAAGGATATTGCAATTGCTGCCATGGGACCAATTCAGCGTTTGCCTGATTACAACTGGTTCAGACGCAGAACCTACTGGAACCGCTATTAG 1446 0.4827 MVYDRLAEAVKTKLRRLENPDSRFLKHGSPVPTLVDHTRVLGAPETRVTTLPNGLRVATESSLASKTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTAKRTVRELEEEIENMGGHLNAYTSREQTTYYAKVTDKDVPKALDILADILQNSKFDENRISRERDVILREMEEVEGQMEEVIFDHLHATAFQYTPLGRTILGPTQNIKTITKDHLQNYIQTHYTAPRMVVAASGAVKHEDIVEQVKTLFTKLSIVPTTASQLVAKEPAIFTVKFNDYFTVLQKQVRILDDDIPLAQFAVAFEGAAWTDPDSIALMVMQAMLGSWNNSELAQRVGINEVAESMMAFNTNYKDTGLFGVYAVAKKDSLDDLSYAIMHETTKLAYRVSEDDVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRTYWNRY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02462 481 Pfam Insulinase (Peptidase family M16) 56 203 IPR011765 -
Cca01g02462 481 PANTHER METALLOPROTEASE 1 481 - -
Cca01g02462 481 Pfam Peptidase M16 inactive domain 210 396 IPR007863 -
Cca01g02462 481 PANTHER BNAA01G33220D PROTEIN 1 481 - -
Cca01g02462 481 ProSitePatterns Insulinase family, zinc-binding region signature. 77 100 IPR001431 GO:0004222|GO:0006508
Cca01g02462 481 Gene3D - 36 253 - -
Cca01g02462 481 SUPERFAMILY LuxS/MPP-like metallohydrolase 43 249 IPR011249 GO:0046872
Cca01g02462 481 Coils Coil 105 125 - -
Cca01g02462 481 SUPERFAMILY LuxS/MPP-like metallohydrolase 285 471 IPR011249 GO:0046872
Cca01g02462 481 Gene3D - 278 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02462 Cca-Chr1 53847698 53854868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02462 K17732 - gmx:100800696 862.833