Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02433 ATGGTCCAAGTCGAAGAGATTGAGCTTGATTTGGGGTTGTCCATAGGGGGCAACCACATCCACATGGTGGAGGAGAAGGCCGCACCCCACCACCACCACAAGCGCGACATTCAGGCTCTGCCAAGGATGGAGGCCAAGAAGAAGCGCCAGCAGAAGAGGGAGCGAGAACCCCAATGGGAACACCAACACCAACACCCTTTTAAGAGATCCACCCCTCTCCACCACTTCACCTTCCCCTTTTGCCTCCCAACCCCCAACAATCTCGCCGTTAACTCCTCTTCTTCTCCGCTTTCCGATTACCAAACCTCTTCCCGTGAAGAAGGTGGAAGCAGCGACAGCCAGAGCCATTCAGTTCATTCGTTGGCAGAAGCAAGCCAGATGAAGAATTGCAAGGAAATGAGCATAGGAAGCCAAGCTGAAGAAAGTGGTTGTGCTTCATCTTACCCTATGAGACCAGAACAACGAAACAACACCCAAGAGAGAAAGCACATTGTTTTGGAAACTCAAGCAAAACCAGCCGAGCCACAGAAGCAAGAAACAACTCCCACAAGCATCGTTGCACTTTCAATTGAAAACTCAAGCACCAACACCAACACCAACCCCTTGGTGGAGACTAAAGTTGACATAACAGGAAAGCCACCACAGCCCCTCTCTCAAGCCTCTTCGCTCCCTCAAATGCCTTACGTGTCCACAAAAGGAACCAATGGGAAAACCGTGAATGGGTTTCTCTACAGATACACCAAATCTGAAGTTAGCATTGTTTGTGTCTGCCATGGAAGCACATTTTCACCCGCGGAGTTTGTGCAGCATGCAGGGGGCACAGACATCTCACATCCTCTCAGACACATCACAGTAATTCCTTCTGCCTTTGGCTGA 876 0.5023 MVQVEEIELDLGLSIGGNHIHMVEEKAAPHHHHKRDIQALPRMEAKKKRQQKREREPQWEHQHQHPFKRSTPLHHFTFPFCLPTPNNLAVNSSSSPLSDYQTSSREEGGSSDSQSHSVHSLAEASQMKNCKEMSIGSQAEESGCASSYPMRPEQRNNTQERKHIVLETQAKPAEPQKQETTPTSIVALSIENSSTNTNTNPLVETKVDITGKPPQPLSQASSLPQMPYVSTKGTNGKTVNGFLYRYTKSEVSIVCVCHGSTFSPAEFVQHAGGTDISHPLRHITVIPSAFG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02433 291 MobiDBLite consensus disorder prediction 91 158 - -
Cca01g02433 291 MobiDBLite consensus disorder prediction 27 67 - -
Cca01g02433 291 MobiDBLite consensus disorder prediction 27 72 - -
Cca01g02433 291 MobiDBLite consensus disorder prediction 212 226 - -
Cca01g02433 291 PANTHER NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN 90 290 - -
Cca01g02433 291 PANTHER NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN 3 56 - -
Cca01g02433 291 MobiDBLite consensus disorder prediction 206 226 - -
Cca01g02433 291 MobiDBLite consensus disorder prediction 91 124 - -
Cca01g02433 291 Pfam Tify domain binding domain 251 284 IPR032308 -
Cca01g02433 291 PANTHER AFP HOMOLOG 2 3 56 IPR031307 GO:0007165
Cca01g02433 291 PANTHER AFP HOMOLOG 2 90 290 IPR031307 GO:0007165
Cca01g02433 291 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02433 Cca-Chr1 53416595 53418645 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02433 - - ccaj:109806433 553.518