Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02430 ATGACAATAATGGAGGCTGAAGTGCTGAAATTGAACACCCGTCAAAAGAGAGAGGACTCAAGTGACTCAGGTGACTCAGATCTAGAAGTTGTTCCAATTGCACCCGTTCGCAAAACGTTGGTTATAGAAGGAGGGAACGTTGGAAACGATGGAATGAAGGAAGAAAATAGTGATCCTGTTAGTCTTTATTTCAATCCTTCTGATTCTTCAGTGTATGTCCGAAATGGAGCAGCTGTAGGCATAGCCATGTCATCAACGGAGGAAGTGCGAGAAATCTATTTGAAAAATATATTCATGATGCCACCCAACCATGAATTATTTTGTCCCAACTGTAACGTTGGCATCAACAAGGTCTTATTTTGCGCAACACAACCACACAATGTTGCACCTTCACTTCCTCATCAGCCTCCACGACCTCCAGTTATCCAACCTGTTCATGAAAATTTAACTCCAGAGAATCCTGATCCCCATCAGGGTATTGAAGCTCCAGTAAGATGCTCTGAATGTTTCAGTTTACTCATTCAAAAGGGCAAAGAGTTTATTACTGGGTTGGTATCATCGCGTGTTCCGCCAGGGTCGGGGCAAGATGTATCCATTGCTATACCAGTTTCACCTATTACAAATccaccaccaccggtaatgccaccaccaccgccagtaccaGAAGATAGTAAGGGTTGGGAAATTCTTAAAAGCGTTGTCTACGGTGGTTTGGCTGAATTATTAGCAAGCCTCAGTGTTGTGACATCTGCAGCAAGTGCTGATGCTACCACATTGAGTATTGTTGCTCTCGGTATTGCAAATCTGATTGGTGGACTTTCAGTCTTGGGTCATAATCTTAAAGACCTTAGAGCTTCACAACCAACTCCAAGAGAGCAAGGCAGTGAAGGAGACACAGAAAATGATAAATATTATGAACTATTGGGGAAGAGGGAGAATTTCTTTCTACATGCCTTTTTTGCTATCTTATCATTCCTTATATTTGGATTGGTGCCCCCAATAGTGTATGGCTTCTCATTCAGTGAGAGTGATGACAAGGATCTCAAGCTTGCAGCAGTTGCAGCAACTTCACTCATTTGTATCACATTGCTAGGCATTGCCAAAGCTCATATCCAAAGACGTAATTCTTATGTCACATACCTCACAACGGTGGCGTTTTATGTTACCTCTGGAGTATTGGCCTCACTTCTTACTTATGTAGCTGGAGCCTTTATGAAGAGACTCGTAGAACAGCTTGGATGGTTTCAGCCAAAATCAAACGTTGCCTTGTCATCACTTGCTGAAATGAGTATGGTGAAATCAGGATGGGGTTCGTACTAA 1320 0.4091 MTIMEAEVLKLNTRQKREDSSDSGDSDLEVVPIAPVRKTLVIEGGNVGNDGMKEENSDPVSLYFNPSDSSVYVRNGAAVGIAMSSTEEVREIYLKNIFMMPPNHELFCPNCNVGINKVLFCATQPHNVAPSLPHQPPRPPVIQPVHENLTPENPDPHQGIEAPVRCSECFSLLIQKGKEFITGLVSSRVPPGSGQDVSIAIPVSPITNPPPPVMPPPPPVPEDSKGWEILKSVVYGGLAELLASLSVVTSAASADATTLSIVALGIANLIGGLSVLGHNLKDLRASQPTPREQGSEGDTENDKYYELLGKRENFFLHAFFAILSFLIFGLVPPIVYGFSFSESDDKDLKLAAVAATSLICITLLGIAKAHIQRRNSYVTYLTTVAFYVTSGVLASLLTYVAGAFMKRLVEQLGWFQPKSNVALSSLAEMSMVKSGWGSY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02430 439 PANTHER GLYCINE-RICH PROTEIN FAMILY 203 439 - -
Cca01g02430 439 PANTHER GLYCINE-RICH PROTEIN FAMILY 67 202 - -
Cca01g02430 439 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 67 202 IPR008217 GO:0005384|GO:0030026
Cca01g02430 439 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 203 439 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02430 Cca-Chr1 53392038 53399021 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02430 - - gmx:100789148 474.552