Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02429 ATGGAAGTTACATTAACTCCATCAAATGAAGCAGAGAATGAGGTTGAAGAAGTGGGCTTGCAAAGAAGGAGGCATCTCCAGCTCAGTAGCACTAACGCCAGTGCTAGCAATTCAAATGAGGACATTCAAGTTAAAGGTGGAGGTATAGAGTTCGATGAATCCGAGACCAAAGAGAAATTTGACATTATCAGAACAGAGGTGTATACTGAAACGATCCTAAAACATGAGGAAACAGAGAATATCACAATTTTACCAGCTTCTGATGATCTTCCTCTTCCTCAGTATTCTACTTCGAAAAATGTGACGTCTGAAATTGTAACAGTTGGCACAATGAAAGAAAATAAGGAAAGGCAAGAATTATATTTGGAAAGGGTATTTGAGATACCTCCAACACATGGATTCTACTGTCCCAATTGCAAATCTTGTATCCAAAAGGTCTACATTCAAAAGGGTGAATGGGAACAAATTAATGCTCCAATTCAACCCCTGCAACCAATTGAGCAAATAAGATGCTCATCTTGCTTCACTTTCCTCATTCCAATAGGTAGCTGGTTTTTCTCAGGGTTGGCATCTGATGAAAGTGACGCATCTAAAGATCAAGGTACCTCAAAATCAGCCATTAAAATTGCAGATGACAAAGGGAAACAAAGTCTTCAGGCCACTGAAAAAGAGGCCCTACCAGGCCTAGAACCACAAAATGTAGCCACCGAAGTGGAAGATAAAACTGACTCTTCAGAAAAGAGTGATTGGAGAGTTATCACTATACCCAAGCAACCTGATATTCAAATTCTTGATGAGAAACAAGATGAGCATGTTGAGGTTAAAATCGATGAAGTTGACACAGgagcaggagcaggagcagcagcagaagTTGTTACTACTGAAAGCACAGCACTTATTACGACAACTGTAACAGCAAGTAGTAAGACATTGGAGATTCTTAAAAGCATTGTGTACGGTGGTTTGCTTGAATCGTTGGCAAGTCTTAGTGTTGTGACATCTGCAGCGAGTGCTGACGCTACCACATTGAACATTGTGGCGCTGGCTATTGCAAATCTGATTGGTGGACTTTTCGTACTTGCTCATAATCTGGAGGAACTAAAATCGGAACAAGTGGATCGATACATTGAGTTGTTGGGGCAGACGAAGAATttcattcttcatgcttctattgcagtcttatcattcattgttTTTGGATTAGTGGCACCACTGGTATATGGCTTTTCATTTCTTGAGAGTGATGAGAAGGATTTGAAGGTAGCTGCTGTTGCTGGAGCTTCTCTGCTTTGCATCATTCTGCTTTCCATTGCCAAAGCATACACCAAGAAACCAAACAGTTACTTGACATACTTCAAAACAGTGATGTACTATGTCACCACTGCTGCTGTGGCCTCAGTGCTTGCTTACTTAGTGGGTGATCTTATGGAGAAACTCATACAAAAACTTGGATGTAAAATAAAATGCTTTGGTTTATCGCTTATAACCCAAGAGCTCACAGCTTTATTCCTAGCAGCAAGATTAAGTTGTAGCACCTTTATAGAGGCTAACGTTCACACCGTGCTAGATCTTATATCTCTTATGTCAACATTATTGGTTATATGGATGATGAGATTCAAGTTAAAGTCATCCTATATCAAGGACCTTGACAACCTGCGACTATACTTTGTGGTGGTTCCTGTTGCAATCCTTGCGATACTAATCCACCCTTTTATATTTTCTTGGAGTTTATTTCTTCGAATTATTTGGGCATTCAGCTTGTATTTGGAAGCTGTTTCTATTCTACCCCAACTTCGTTTTATGCAGAACGCAAAGATGATTGAAACATTTACAGGGTATTATGTATTCGCCCTCGGTATTTCAAGATTCATGGGACTGGCTTATTGGATAATTCAGATGTATGAGACTGGAGGGGGACGATTCTATTGGGGTGGGGGTAACTATTTCTGGTTCTTGGCATCTTTCATTGCTGAAATGGTTCAATCCTTCATCTTGGCTGACTTTTGTTATTATTACATGAAGAG 2024 0.3859 MEVTLTPSNEAENEVEEVGLQRRRHLQLSSTNASASNSNEDIQVKGGGIEFDESETKEKFDIIRTEVYTETILKHEETENITILPASDDLPLPQYSTSKNVTSEIVTVGTMKENKERQELYLERVFEIPPTHGFYCPNCKSCIQKVYIQKGEWEQINAPIQPLQPIEQIRCSSCFTFLIPIGSWFFSGLASDESDASKDQGTSKSAIKIADDKGKQSLQATEKEALPGLEPQNVATEVEDKTDSSEKSDWRVITIPKQPDIQILDEKQDEHVEVKIDEVDTGAGAGAAAEVVTTESTALITTTVTASSKTLEILKSIVYGGLLESLASLSVVTSAASADATTLNIVALAIANLIGGLFVLAHNLEELKSEQVDRYIELLGQTKNFILHASIAVLSFIVFGLVAPLVYGFSFLESDEKDLKVAAVAGASLLCIILLSIAKAYTKKPNSYLTYFKTVMYYVTTAAVASVLAYLVGDLMEKLIQKLGCKIKCFGLSLITQELTALFLAARLSCSTFIEANVHTVLDLISLMSTLLVIWMMRFKLKSSYIKDLDNLRLYFVVVPVAILAILIHPFIFSWSLFLRIIWAFSLYLEAVSILPQLRFMQNAKMIETFTGYYVFALGISRFMGLAYWIIQMYETGGGRFYWGGGNYFWFLASFIAEMVQSFILADFCYYYMK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02429 674 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 14 485 IPR008217 GO:0005384|GO:0030026
Cca01g02429 674 PRINTS ER lumen protein retaining receptor signature 619 637 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca01g02429 674 PRINTS ER lumen protein retaining receptor signature 491 511 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca01g02429 674 PRINTS ER lumen protein retaining receptor signature 605 619 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca01g02429 674 PRINTS ER lumen protein retaining receptor signature 583 603 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca01g02429 674 MobiDBLite consensus disorder prediction 194 214 - -
Cca01g02429 674 MobiDBLite consensus disorder prediction 1 43 - -
Cca01g02429 674 Pfam ER lumen protein retaining receptor 489 632 IPR000133 GO:0006621|GO:0016021|GO:0046923
Cca01g02429 674 PANTHER GLYCINE-RICH PROTEIN FAMILY 14 485 - -
Cca01g02429 674 MobiDBLite consensus disorder prediction 226 248 - -
Cca01g02429 674 MobiDBLite consensus disorder prediction 24 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02429 Cca-Chr1 53351940 53376391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02429 409 674 Miscellaneous Gene Families AT3G25160 48.872 1.94e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02429 - K10949 ccaj:109806237 727.243