Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02358 ATGATGCCTGCATACAGAAGCATGGACTCGTACCCATATCAGAGACCGTTCCCTCCTTATTATCATCCTGGCATTGAGGCAATGCCCCCTCAAATGAAAGTTGATCCATCAAAACCACCCTTTTCTTATGACCAACATTGGCCATATGTTGCCAATTTCGGGCACCCTATTCCCCCACATTTCTGCTGTGGCCACAACAACTTCCCTTGTTATTATAGCCACATTCCTTCATATCCTCATGCTCCTTCTCCAATGTGCTATTCTGGAGGCTGTCCTTCATATAGTGAACCGTATTTTGTTCCTTATTCCCCACAACCACATTATACCATGGAGCTGCCTAGATATGAATATGATAAGCACATGCCCCGAGAGCATCATTGTTGTGGTTGTTCTAATCATCCATGCAACCAAAAGGAAGGTAGAAGTGTGAAGATTGAGGAGCATGAACCTGATGATGGAAAGAAAGTGAATGATGCTTTGGTTCCAGTTCAGCTTAAGAATTATCCATATCAATTGGTTTGGGTCCCACAGGATTACTCAAGTAACAAACAGCTGAAAAATCCTAATGTAATGGAGGTGGCTGAACAAGACAAGGTATCACATGATAGAAAGCCTTCTGGTCTTGAGAATTTTAAAGCTGATGCACAGCCATCTGAGGAACCTAGAGTGTGGAATGGATGGTTACCCTTTGATATAAAGGGTGCCCCAGACATGTTTCATGATGGATATGGAACAAGAAACCAGAAACCGGAGTCTGAGAATAATAGAAGGGAATTTGAAGATGGAAAAATGGACCAGAAACACCAGAGTGAACACAAGAGATCCGAATTTCCATTCCCTATCTTCTGGGTGCCTTACTACAATAAGCAGGAGGAAAGTGGAAAGGCTAACAATCAGGAGAACACTTCTTCACCAAAAATCATTGAGGAGGTGCCTCATACATTCAAATCTGTTCCAGTGAAGTCTCATGTTGATGAAGGTGCTTTAAAAGGAACCGGTTCAAATCAAGTTGGGCACAAAAACACAGATGCTTCGGATGCTGTAGAGAAAGTGACTAATGCCAGAAGCATACCTGTGAAGCAGATAGAATCGCATCAAGGAAAAAATGAATCGGAGGGAGATCACCAACGAGAAGTGAATGTGACAAAAAAGGATTCTGGCACTGGTGACAAAAAGAGACAATCTACATCTTCACCAAAAGCATCCAAATTAGCTCCTGTTTGCCTGAGAGTTGATCCACTACCAAGGAAGAAAAATGGAAATGGTAGTTCGAGGTCGCCGAGTCCACCTTCCTCAAAAGAACATTCCCGAGCTACAAATGGTGAAGCATTCAAGACTCCTGTGTGTGGCACAAATGACAAGGCTTCGTCAGGTTCAAATCATAACAATGCTACAAGCATTAGTGAGAAAGTAAAACCAAGGGAGATGAAAACAATTCAGGTGTCTGAATATAAGACTAATGAAAACAAAGGTGTTGACGATGGATGTAAGAGCCAGACAAATGTAAACATACCCAACGAAGGTCCAAAAGGGAAAAGGGAAACTTGTACGGATGGTGATGAATATAAGACTGAAGACCAAGGGGCAGAAAAAATGAAGGGGGAAACTATAGAACTAAAGGAAGAGAACGATTCAAGCATACCAACTGATGCAGGTCGAAAAGAGGGAAGAGTTTTGTCAGATGCAGATGCTGCTGTTTTGATTCAAGCTGCATATCGCGGTTATCAAGTTAGAAAATGGGAACCATTGAAGAAATTGAAGCAGATAGATGAAGTCAGAAGGGAGGTGGCTGATGTTTACGGCCGTGTTCAAGCTTTTGAAAGATCTTCTGATCTTCAAAATGATGAAAAGCAAAAGATCGCAATTGGAGAGACCATAATGAGACTGCTGCTGAAGCTGGATACTTTGCAGGGTTTGCATCCAAGTTTCAGGGAGATCAGAAAATCCTTGGCTAGAGAGCTCACAAGCTTGCAAGAAAGGCTTGATTCTATAACGGCCAAGAAACCACAGCAGGAGATGCAGGATTTCGATGTTCAGAAACACGTTGAAGTTACTCCAAATGATACACAGAATGAAGAACATGTGCAAAGGGAGCAAGAAGAAAAAGTTGCTACACCAGGAGATTCATCTGAAGACATTACTGACGATGTTAAAGGTCCTTGTGCTAGTGATGGTAAAAGTGAATCTCAGTCACCAGTTGATCCAGCATCAAACGAGAGAGCAGAGCATATCGTACTTCCAAATGGATCATATAGGGAGGATACAAGCCAAGTGGTTACAGCTGATGCATTGAATCCTACAAGTGATGTCTCTGATACTAACAAAATGGCTGCAGAACCTGAAGCCAAATCAGAAGCAAATGACATTCCCACTGAGGCTGACGAATTAGATACGACTGATTCGGAAGAATTCCCCGTGGAAGTTGTTGGTGAAGATTGCAAGGATGTTAGTATCAAGAAAGAAGAACATGACGATGTTAACACTGTGAATCTCGCAGCTGTGGTGGATGATTCTGCACACGATCCATTAGATTCAGAGAACCATGCAATAATGGAACTTCCAGTAGGATTGCTTGATAAGGATGAAGGGGACAATGAAATGAATATTTCAAAAGAGAAAGCACAAACCGAAAATGAGATAATTTTTGAAGAGCTACCTGTGCGACTACTTGATGAGGATACAACAATATCTGGAGTTAAGAAGCATGATCAAACTAAGCCTAAAACATATAAAGAGGTTCTACTAGCTCAAGAAGGGGAATTCAATGTAGATGAGAAACCAAGTTCTTCCACAGATGACACTGCTAAGCAAACTCAACTAGAGCAACAACAACATCTGGAAGAGCAAGAAGAGGTGCAATCTTCTGGGGAATCAGATGGCTGGGTGAAGATTGAGTTCCAAAATGAAGGTGAACTCAAAGGGGATGATGATTCACCAATGGATATGGTGGTTGAGTGTAAGTCGGGTGAGGAAGTTGGAAATGATACTAAGTTACCTCCTTTGACAGCACAAGACAAGGGTGATGAACCAGGGAATGAAGATGCAAGCATGGAAGCAAATGATGTAAATAGCATCTCTCCAGAGGCAATGAAGTTCGTGCCTATCAGTGACATGCAGAAGGAAGAGGAGCCAGAAGAAAAGATTGCACAGAGGGAGACACAAGAGATGGTTGTTGAACAGGCAATTAATGACGATGATAAAGACACACAAACTTTGGCTCAAGAGAAAACTGAACTATCTGATGGAGGGTTAAGTGGTGATTCAAAGTTATTGGAAGAGAATGAGAAGTTGAGAAAGATGATGAAGAAGTTGCTTGAAGCTGGGAATGAACAGTTAAACGTAATATCAGATTTGACAGGCAGAGTGAAGGACTTGGAGAAGAAATTAGCAAGAAGTAGGAGTAAGAGAGTGAAGACAAAGCGGTATAGACCAGCAACTTCCAAAATGTCTTGCATGAAATCCTCCAAATAA 3471 0.4183 MMPAYRSMDSYPYQRPFPPYYHPGIEAMPPQMKVDPSKPPFSYDQHWPYVANFGHPIPPHFCCGHNNFPCYYSHIPSYPHAPSPMCYSGGCPSYSEPYFVPYSPQPHYTMELPRYEYDKHMPREHHCCGCSNHPCNQKEGRSVKIEEHEPDDGKKVNDALVPVQLKNYPYQLVWVPQDYSSNKQLKNPNVMEVAEQDKVSHDRKPSGLENFKADAQPSEEPRVWNGWLPFDIKGAPDMFHDGYGTRNQKPESENNRREFEDGKMDQKHQSEHKRSEFPFPIFWVPYYNKQEESGKANNQENTSSPKIIEEVPHTFKSVPVKSHVDEGALKGTGSNQVGHKNTDASDAVEKVTNARSIPVKQIESHQGKNESEGDHQREVNVTKKDSGTGDKKRQSTSSPKASKLAPVCLRVDPLPRKKNGNGSSRSPSPPSSKEHSRATNGEAFKTPVCGTNDKASSGSNHNNATSISEKVKPREMKTIQVSEYKTNENKGVDDGCKSQTNVNIPNEGPKGKRETCTDGDEYKTEDQGAEKMKGETIELKEENDSSIPTDAGRKEGRVLSDADAAVLIQAAYRGYQVRKWEPLKKLKQIDEVRREVADVYGRVQAFERSSDLQNDEKQKIAIGETIMRLLLKLDTLQGLHPSFREIRKSLARELTSLQERLDSITAKKPQQEMQDFDVQKHVEVTPNDTQNEEHVQREQEEKVATPGDSSEDITDDVKGPCASDGKSESQSPVDPASNERAEHIVLPNGSYREDTSQVVTADALNPTSDVSDTNKMAAEPEAKSEANDIPTEADELDTTDSEEFPVEVVGEDCKDVSIKKEEHDDVNTVNLAAVVDDSAHDPLDSENHAIMELPVGLLDKDEGDNEMNISKEKAQTENEIIFEELPVRLLDEDTTISGVKKHDQTKPKTYKEVLLAQEGEFNVDEKPSSSTDDTAKQTQLEQQQHLEEQEEVQSSGESDGWVKIEFQNEGELKGDDDSPMDMVVECKSGEEVGNDTKLPPLTAQDKGDEPGNEDASMEANDVNSISPEAMKFVPISDMQKEEEPEEKIAQRETQEMVVEQAINDDDKDTQTLAQEKTELSDGGLSGDSKLLEENEKLRKMMKKLLEAGNEQLNVISDLTGRVKDLEKKLARSRSKRVKTKRYRPATSKMSCMKSSK 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02358 1156 Coils Coil 1115 1135 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 511 530 - -
Cca01g02358 1156 Pfam BAG domain 589 663 IPR003103 GO:0051087
Cca01g02358 1156 MobiDBLite consensus disorder prediction 244 274 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 685 722 - -
Cca01g02358 1156 Coils Coil 1087 1110 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 1035 1074 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 685 809 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 419 437 - -
Cca01g02358 1156 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 6 8 1155 - -
Cca01g02358 1156 Coils Coil 647 667 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 750 774 - -
Cca01g02358 1156 SMART BAG_1 588 665 IPR003103 GO:0051087
Cca01g02358 1156 MobiDBLite consensus disorder prediction 964 992 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 239 274 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 490 530 - -
Cca01g02358 1156 Gene3D BAG domain 570 669 IPR036533 GO:0051087
Cca01g02358 1156 MobiDBLite consensus disorder prediction 1127 1156 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 325 473 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 365 391 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 776 790 - -
Cca01g02358 1156 ProSiteProfiles BAG domain profile. 588 665 IPR003103 GO:0051087
Cca01g02358 1156 MobiDBLite consensus disorder prediction 916 1088 - -
Cca01g02358 1156 Pfam IQ calmodulin-binding motif 563 580 IPR000048 GO:0005515
Cca01g02358 1156 SUPERFAMILY BAG domain 580 664 IPR036533 GO:0051087
Cca01g02358 1156 ProSiteProfiles IQ motif profile. 561 590 IPR000048 GO:0005515
Cca01g02358 1156 MobiDBLite consensus disorder prediction 450 467 - -
Cca01g02358 1156 MobiDBLite consensus disorder prediction 791 806 - -
Cca01g02358 1156 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 8 1155 IPR040400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02358 Cca-Chr1 52174836 52180326 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02358 - - gmx:102668563 1577.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02358 01 52174836 52180326 Cca01g02358 01 52174836 52180326 ECH