Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02353 ATGGGTTCCTTGGAATCAGGGATCCCATTGAAAAAATCGAGTTTGTTTGGTCCTCAGCTCAGCAGAAAGGAGAAGAACCCTTTTTCTCACAGGTTCAGATCGAGCTTCTCGAGGTTGCTCTTCAAGAAGCTCGATTACGTGCAATGGATTTGCACGGTGGTGGTGTTTCTGTGTTTGGTCGTTGTGTTCCAAATGTTTCTGCCAGGTTCGGTTGTGGAAAACGCGGGGGAAGAGTCGTTGAAAGCTGTGGGAATGCGGTCTGATAATTTGTTCCATTTTGGAGACTTTGACAAGCTTGTGTTGGACATTGGGGAGGATGCTGTTTTTCTGCCTAGGATTTCGGAGAAATTCAGGAGAGGTGGGGATGTGGATTTGTTTAATCACTCAGTGCAGCATTTTGGGTTCAGGAAACCTCAGTTGGCATTGGTGTTTGGAGAGCTGTTGGTTGATTCACAACAATTACTTGTGGTGACAATTGCATCTGCTTTGCTAGAGACTGGCTATGAAATCCAGGTCTTTTCACTTCAAGATGGACCAGGGCATAATGTGTGGAGAAACTTAAGAGTTCCAATCACTGTCATTAGAACTTGTGATAAGCGCAACAACTCTGTAGACTGGCTAAACTATGATGGTATAATTGTGAGCTCTCTGGAAGCCAAGGGTGCCTTTTCTTGTTTTTTGCAGGAGCCTTTCAAGTCTATCCCTCTTATATGGATCCTTCATGAAAATGCTCTTGCTTATCGATCAAGGAAATATGCCACTAATGGGCAGATTGAACTTTTGAATGATTGGAGAAGAGTTTTTAATCGTTCCACAGTAGTTGTTTTTCCAAACTATGCCTTGCCGATGATTTACTCCACATTTGATGCCAGAAATTTTTATGTCATTCCTGGTTCCCCTGCTGAAGCATTAGAAGCAGAAGCATTTATGGCCTTACAGAAAGATAATTTGCGTGTCAATATGGGCTATGGCCCAGAAGATTTGATTATTGCAATTGTGGGCAGTCAATTTTTGTACAAGGGCATGTGGTTGGGGCATGCCATTGTTTTACGAGCCTTAGAACCACTTCTGGCAGACTTCGTTTTAAACAAAGATAATTCGAGTGCACAACTGCGTGTCATTGTTCATAGTGGGGAATTAACTAATAACTACAGTGTGGCTCTTGAGACCATGGCGCATAGCTTGAAATATCCAAGAGGTGTTATAGAGCATATAGCTGGAGATTTGAATGCCGATTCTGTTCTTGGCGCAGCAGATGTAGTGATATATGGATCCTTCCTTGAAGAACAGTCTTTTCCAGAGATTTTGATCAGAGCTATGTCCTTTGAGAAACCAATTATTGCTCCTGATGTTCCCATGATCAGAAAATATGTGGATGACAGGGTGAATGGTTATCTTTTCCCAAAGGATAATATAAGAGTTCTGAGGCAAATTTTGTTAAAAGTGATCTCAAAGGGGAAAATATCACCCTTGGCTCGTAACATTGCCTCAATAGGGAGAAGCACTGCAAAGAATCTTATGGTTTCAGAAGCAATTGATGGATATGCATCTTTACTTCAGAATATTCTCAGGCTTCCATCAGAGGTTGCACCACCTAAGGCTGTTTCAGAAATTCCTTCCAATGTTAAAGAACAATGGCAGTGGCATTTGTTTGAAGCCGTTCCAAATATGACATATCAAAATAGGGCACTAGGAAGTAACACGTTTTTAGATAAATATGAGGACCAGTGGAATCATTCTCAAAAAAATAGATCCACTACTACAGTTGCAGCTAGCGATACATTTGTATATAGCATATGGGAAGAAGAAAAATATACTCAACTGGCTATTACGAAAAAAAGGAGGGAGGATGAAGAGCTGAAGGATAGAACAGAGCAGTCACATGGAACATGGGAGGATGTATATAAAAATGCTAAGAGGATTGACAGATTAAAAAATGATTTACACGAAAGAGATGAAGGAGAGCTTGAGCGGACAGGACAACCACTATGCATTTATGAGCCTTATTTTGGTGAAGGATCCTGGCCTTTTCTACATCAAAAATCTCTTTATCGTGGAGTTGGCGTGTCCGGTAAAGGTCGAAGACCTGGGAGAGATGATGTTGATGCTCCTTCTCGGCTACCACTGCTTAATAATGGCTACTATCGAGACTTGCTTGGTGAATATGGAGCCTTCCTTGCAATTGCAAACAGGATTGACCGTTTACACAAAAATGCTTGGATTGGATTTCAGTCTTGGAGAGCAACAGCAAAAAAGGCATCTTTGTCCAGAACTGCTGAAAATGCATTATTGGATGCCATTCAATCCAAAAGGTATGGGGATGCACTATATTTTTGGGTGCGCATGGATATGGATTTACGAAACCCTTTGCAAAAGGACTTTTGGTCATTTTGTGATGCCATTAACGCAGGAAATTGCAAGTTTGCTTTCTCCTCAGCCATGAGGAGAATGTATGGGTTAAAAGATGATATGGATTCTTTACCTCCCATGCCTGTAGATGGTGATACATGGTCTGTCATGCATAGTTGGGCTCTGCCTTCAAGATCCTTTTTGGAGTTTGTAATGTTCTCCAGAATGTTTGTGGATGCATTGGATGCGCAAATGTATGATGAACACCATTCAACAGGACACTGTTCTTTGAGTTTGTCAAAAGATAAGCATTGTTATTCACGTCTTCTTGAGGTTGTTGTAAATGTGTGGGCATACCACAGTGCTAGGAGGATGGTGTTTGTGGACCCTGAGACTGGCCTAATGCAGGAACAACACAAGTTCAAGAGCCGCAGAGGTCAAATGTGGATCAAATGGTTCTCATACACCACCCTTAAGAGCATGGATGAGGACTTAGCAGAGTTATCAGATTCTGAGGATCCTTCAAGGCGTTGGTTGTGGCCATCAACGGGTGAAGTATTCTGGCAAGGTGTATACGAGAGGGAGAGAAGCTTAAGGCACAAGGAGAAGGAAAAGAGGAAGCAGAAGAGTATAGAAAAACAGACTAGAATGAGGAAGCGTCATCGCCAACAAGTGATAGGGAAATACATTAAGCCCCCACCAGATGTGGAAACCTCTAATACATCCGTGCTTGCATCATGA 3090 0.4204 MGSLESGIPLKKSSLFGPQLSRKEKNPFSHRFRSSFSRLLFKKLDYVQWICTVVVFLCLVVVFQMFLPGSVVENAGEESLKAVGMRSDNLFHFGDFDKLVLDIGEDAVFLPRISEKFRRGGDVDLFNHSVQHFGFRKPQLALVFGELLVDSQQLLVVTIASALLETGYEIQVFSLQDGPGHNVWRNLRVPITVIRTCDKRNNSVDWLNYDGIIVSSLEAKGAFSCFLQEPFKSIPLIWILHENALAYRSRKYATNGQIELLNDWRRVFNRSTVVVFPNYALPMIYSTFDARNFYVIPGSPAEALEAEAFMALQKDNLRVNMGYGPEDLIIAIVGSQFLYKGMWLGHAIVLRALEPLLADFVLNKDNSSAQLRVIVHSGELTNNYSVALETMAHSLKYPRGVIEHIAGDLNADSVLGAADVVIYGSFLEEQSFPEILIRAMSFEKPIIAPDVPMIRKYVDDRVNGYLFPKDNIRVLRQILLKVISKGKISPLARNIASIGRSTAKNLMVSEAIDGYASLLQNILRLPSEVAPPKAVSEIPSNVKEQWQWHLFEAVPNMTYQNRALGSNTFLDKYEDQWNHSQKNRSTTTVAASDTFVYSIWEEEKYTQLAITKKRREDEELKDRTEQSHGTWEDVYKNAKRIDRLKNDLHERDEGELERTGQPLCIYEPYFGEGSWPFLHQKSLYRGVGVSGKGRRPGRDDVDAPSRLPLLNNGYYRDLLGEYGAFLAIANRIDRLHKNAWIGFQSWRATAKKASLSRTAENALLDAIQSKRYGDALYFWVRMDMDLRNPLQKDFWSFCDAINAGNCKFAFSSAMRRMYGLKDDMDSLPPMPVDGDTWSVMHSWALPSRSFLEFVMFSRMFVDALDAQMYDEHHSTGHCSLSLSKDKHCYSRLLEVVVNVWAYHSARRMVFVDPETGLMQEQHKFKSRRGQMWIKWFSYTTLKSMDEDLAELSDSEDPSRRWLWPSTGEVFWQGVYERERSLRHKEKEKRKQKSIEKQTRMRKRHRQQVIGKYIKPPPDVETSNTSVLAS 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02353 1029 Pfam Glycosyl transferases group 1 385 497 IPR001296 GO:0016757
Cca01g02353 1029 CDD GT4_PimA-like 156 520 - -
Cca01g02353 1029 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1025 - -
Cca01g02353 1029 Gene3D Glycogen Phosphorylase B; 304 486 - -
Cca01g02353 1029 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1025 - -
Cca01g02353 1029 MobiDBLite consensus disorder prediction 982 1029 - -
Cca01g02353 1029 Gene3D Glycogen Phosphorylase B; 156 303 - -
Cca01g02353 1029 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 151 520 - -
Cca01g02353 1029 MobiDBLite consensus disorder prediction 995 1009 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02353 Cca-Chr1 52134823 52142254 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02353 - - gmx:100807455 1852.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02353 01 52134823 52142254 Cca01g02353 01 52134823 52142254 ECH