Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02352 ATGGAGTTGGAGCATCCCACCGCCGCGCCTCTCAACTCCGCCATGACCTTCGACGAAGCCTCCATGGAGCGCAGCAAGAGCTTCGTCAACGCCTTGCAGGAACTTAAGAACCTAAGGCCTCAACTTTATTCTGCTGCAGAATACTGTGAAAAATCTTATCTCCATAGTGAACAGAAACAAATGGTACTTGACAACCTGAAAGATTATGCTGTAAGAGCCCTTGTCAATGCTGTTGATCATCTAGGGACAGTCGCATTCAAGTTAACAGACCTTCTTGAGCAGCAAACATTGGATGTCTCAACTATGGATTTGAAGGTTGCTACCCTGAATCAGAAACTTCTTACATGCCAAATTTACACTGATAAAGAAGGTCTACGGCAGCAGCAATTGTTGGCTTTCATTCCCAGACATCATAAGCACTACATTTTGCCAAATTCTGTCAATAAAAAGGTGCATTTCAGTCCACACATACAGATTGATGCAAGACAGAATCCATTTCAAACCAGAAACCGTTTTCAATCTTCAGGTACTCCTGCGGCAAAAACTCTTTCATGGCATTTAGCATCAGAGACAAAGTCTACCTTGAAAGGGTCAGCACATGCTTCCCCAAACATTGAGAATCCAAAGTTTTCTGCCAAGGCCTCTGGTGTTTTCCATCTTTTAGATAATGAAGAGAGCACCTGGATGAAATCCTCACCAGCACAAATTCACTTTCCAAATGGAGTTCCTACTTCTAGTACACCCATGCACACTTTGGGTAGTACACGCAAGGATGCATTGGAGGGTTCCAGACCACTGACGGCATACAGGTCATTTGACAACCCAAATCGGCGTGAGAATGTCCAAATCCCTACTCGAAGCAAAAGTGTGCTATCAGCTTTCTTTGTGAAGCAGAAAGCACCCAAGTTGAAGGCTGGTTCTTTCTCATGA 930 0.4419 MELEHPTAAPLNSAMTFDEASMERSKSFVNALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAFKLTDLLEQQTLDVSTMDLKVATLNQKLLTCQIYTDKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPHIQIDARQNPFQTRNRFQSSGTPAAKTLSWHLASETKSTLKGSAHASPNIENPKFSAKASGVFHLLDNEESTWMKSSPAQIHFPNGVPTSSTPMHTLGSTRKDALEGSRPLTAYRSFDNPNRRENVQIPTRSKSVLSAFFVKQKAPKLKAGSFS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02352 309 PANTHER ABL INTERACTOR FAMILY MEMBER 12 308 IPR028457 -
Cca01g02352 309 PANTHER BNAC03G72740D PROTEIN 12 308 - -
Cca01g02352 309 Gene3D - 17 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02352 Cca-Chr1 52106091 52111708 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02352 - - gmx:100778182 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02352 01 52106091 52111708 Cca01g02352 01 52106091 52111708 ECH
Cca03g03111 03 52574231 52578663 Cca01g02352 01 52106091 52111708 PCT