Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02351 ATGGCCCTTCTAATCCACTCCCCGGAAGTGTCCGTTGCACCCCAAATTGCCCATAACCCTAACCCTAACCTTCCCAAACTCCACAGCTTCAGACCCCACACAAAGGCCAAAGCGATTGGGCCAAAGCGTGGGGTCAGAATTTCTTGCAAAGTGAAAGACTTTGCGGTTGTGAATCCGTACGGTCAGTTTTCGGTTCCAGTGAAGCGAGGGTCGAAGCAGAGCAAAGAGGAGGAAGAAGAGAAGCAGAATTACTATGTTAATGTTGGGTATGCTATCCGAAGTTTGAGGGAAGAATTCCCTGATCTCTTCTACAGGGAACTTAGCTTTGACATCTACAGGGATGATATTGTGTTTAAGGATCCTATGAACACATTCGTTGGTATTGagaattacaaatcaatcttctgggcactacgatttcatggcaagatgtttttcaaagctttgtgggtggacataagtactgtatggcagcctgttgagaacgtcattatggtgcgctggactgttcatgggatcccacgagttctatgggaaagtcgtggtaggtttgatggaacttctgagtataaacttgacaggcaaggcaagatttttgagcaccgggtTGACAACATTGCTCTGAATTCACCTCCTCGGTTCAAAGTGCTGGGTGTGGAAGAATTAATTCAATCTCTTGGCTGCCCCTCGACTGCAAGACCAACCTATTTTGAAATATCTTCACCTCCTAAGAGAATGTAA 741 0.3212 MALLIHSPEVSVAPQIAHNPNPNLPKLHSFRPHTKAKAIGPKRGVRISCKVKDFAVVNPYGQFSVPVKRGSKQSKEEEEEKQNYYVNVGYAIRSLREEFPDLFYRELSFDIYRDDIVFKDPMNTFVGIENYKSIFWALRFHGKMFFKALWVDISTVWQPVENVIMVRWTVHGIPRVLWESRGRFDGTSEYKLDRQGKIFEHRVDNIALNSPPRFKVLGVEELIQSLGCPSTARPTYFEISSPPKRM 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02351 246 PANTHER - 59 245 - -
Cca01g02351 246 Pfam Uncharacterized conserved protein (DUF2358) 91 201 IPR018790 -
Cca01g02351 246 PANTHER RIKEN CDNA 2310061I04 GENE 59 245 IPR018790 -
Cca01g02351 246 Gene3D - 108 205 - -
Cca01g02351 246 SUPERFAMILY NTF2-like 108 203 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02351 Cca-Chr1 52100956 52103883 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02351 - - gmx:100792423 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02351 01 52100956 52103883 Cca01g02351 01 52100956 52103883 ECH