Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02350 ATGATGGCTACCAATTCCATTTCCTCATCCTCCTTTCGCTTATTCACAACCAGAATCCCTCTCTCCCTCCACAACTTCAAAACCCCAACTCTCCACCCAACACCCTCAAAATCCTTCCTTTTCTTCAAACCCATAACGTTCCAGAGGCTTCCACCAACCCcatcatcatcatcatcaccatctccaccaccatcatctcttcaACCCATCGAAGACCTCCCTCCGAAGCTCCAAGAAATCGTGCACCTCTTCCAATCCGTCCCCGAACCCAAAGCCAAATACGAACAACTCCTCTTCTACGGCAAGAACCTCAAACCCCTCGACACAAGGTTCAAAACCAACGACAACAAGGTCCAAGGCTGCGTCTCCCAGGTCTGGGTCCGAGCCTACCTCGACCCGAACCGCAACGTCGTCTACGAAGCTGACTCCGACTCCGTCCTCACCAAGGGCCTCGCCGCGTTGCTCGTTCAGGGCTTCTCGGGTCGACCCGTTAACGAGATCATTCGGGTCACACCCGATTTCGTTACGCTTTTAGGGTTGCAGCAGAGCTTAACCCCTTCTAGAAATAACGGGTTTTTGAACATGCTTAAGTTGATGCAGAGAAAGGCTCTTATGTTATATGTTGAAGCTGAAAAGGGTGGTGGTGATTCTGGTGGAGGTGAATTGAACTCAATTGAGTCTGAGTTTAATGGGGTTGTTGAGAGTGAGAGTGGTGGGGGAAGTTCTAAAAATGGTGACTTTGAGACACGTGGTGATGAGGGTGATGTAGAATTGggggggagggggaagaggataagggagaagttggagagggagCTTGAGCCTGTGGAGTTGGAGGTTGAGGATGTGTCTTATCAGCATGCGGGGCATGCTGGGGTTAGAGGGGGTGATGGTGAGACGCATTTTAACGTTAGAGTGGTGTCTAGGGAGTTTGAAGGGAAGAGTTTGGTTAAGAGGCATAGGCTTATTTATGGATTGTTGCAGGAGGAGTTAGATGCTGGACTTCATGCGTTGTCAATTGTGGCGAAGACGCCGGCAGAAGTTGAAGGGTGA 1053 0.4606 MMATNSISSSSFRLFTTRIPLSLHNFKTPTLHPTPSKSFLFFKPITFQRLPPTPSSSSSPSPPPSSLQPIEDLPPKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLDTRFKTNDNKVQGCVSQVWVRAYLDPNRNVVYEADSDSVLTKGLAALLVQGFSGRPVNEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLMQRKALMLYVEAEKGGGDSGGGELNSIESEFNGVVESESGGGSSKNGDFETRGDEGDVELGGRGKRIREKLERELEPVELEVEDVSYQHAGHAGVRGGDGETHFNVRVVSREFEGKSLVKRHRLIYGLLQEELDAGLHALSIVAKTPAEVEG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02350 350 MobiDBLite consensus disorder prediction 50 71 - -
Cca01g02350 350 Pfam BolA-like protein 269 347 IPR002634 -
Cca01g02350 350 Gene3D - 260 350 IPR036065 -
Cca01g02350 350 Pfam Fe-S metabolism associated domain 83 202 IPR003808 -
Cca01g02350 350 SUPERFAMILY BolA-like 263 349 IPR036065 -
Cca01g02350 350 PANTHER SUFE-LIKE PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 23 349 - -
Cca01g02350 350 Gene3D - 73 213 - -
Cca01g02350 350 MobiDBLite consensus disorder prediction 55 70 - -
Cca01g02350 350 MobiDBLite consensus disorder prediction 232 258 - -
Cca01g02350 350 PANTHER - 23 349 - -
Cca01g02350 350 SUPERFAMILY SufE/NifU 72 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02350 Cca-Chr1 52097884 52099346 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02350 K22066 - gmx:100779254 474.167