Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02337 ATGGCTTCGAATAAGCAAGAAGAAAAAACAATTCCTTTGAGATATTGGGTGGACGAAAGACAAAACACTGTTGTTATAGCGGAAGCAAAGGGAGACTTTGTGGATGCTCTCTTTAGTTTACTGACCCTTCCATTGGGAACCATCATCCGGCTTGGGAACAAATTTGAACAACCTGTAGAGATTGGTTGCATCAACAATCTGTACCAGAGTGTGCAAGATTTATTAAGCCTTAATGATTTCTGGAACAAGATGTGCAAGGAAATGTTGCTTTCTCCACGCAACCCTTTAGAAGCCTCTTGCCAGAGACTAAAAGTGAATGTGGATGACACACAACCCACAAAGTATTTCATGTGTCACAGCTGTTCAAAGAGCAGTAACTTGTGGGTGAGTACCTTTGATGGGGCAAGGTGCTACTGTGGGAAATTGATGAGAAAAGAAATGGAGCTGCTTGTAGAAGAACCCAAGGAAGACGCTGATGGGGGGAACAGTGTTTTTGTTAAAGGGGATGCTATGTTCTTGATCCATGATGACTTGAGAGTGCTACGAAGTTCTCCTAGTGACTCCGTTCCACCATTCGTCAAACATCGACACAAAGACTTGAGCAAGATGACAGAAAAGTCTCAAAACGTTGGCATGAAGGAGATATTTAGCATACTAAAGCAAGCGCTAACATCTGAAACTCCTctaagtgatgtgttcgtgcctaatagagaatctaagtcatcgtactctttctcaccggatagtggcccaattcattgggaaggttctgtagaaatcaaggtaatagtgagcaaatcagagaataaggttaagtttgttgaagcagatggaaattttgtggattttctagtcagcttcctcacaacacctcttgggtctattctgaaccttatgaatggcaaattgtccttggggagcatagacaacttgtacacaagtgtgaagaagctgaatccatcatggttcaaaggatcatcaaacaaatccttactgaatccaaGGGTAGCTCCTCAATTTGGTTGTAAGAGCAATCCACTAAATGCTTTACAAGAAGAGGACACTCCTAAGTATTGGTATGGCACAGTGGAAGATAATAAGGGGAGTATCAGGAGTGAAAGGAAAATGATTTCAAAGGTAAAAAATCTGTTACGAGATCCAGCAGATACAAAACTTTTTGAGCCAAGATGTTTTGATGGAGCAAGAGAACCTGCTGTGGGATTTATGAAGAGGCCGTGTCTATTTATTGTGAAGGATGATCTGCAAGTCATACCAATCACAACTACTTCCAGCATTACGCATCTGCAACAGTTGGAGAATGTCCAGTTGGATGATTTGGAGGAACATTGGGTGGAAATCAGGAAGGCACATGAGGCACTGAACCTGTTGAGAGCTTCTTTGACATCCAAAGCTACTTTTACACAGTGCCTATCGTACAAACTGAAGAAGTGGAATTGCCAAAGGTGTATTCCATTTTGGGGATGGAAGGATAAGGGATATGAaaagaaaaaaagaaagaagaaagaaaAAGGTCAGGGAGGTAATTAG 1548 0.3282 MASNKQEEKTIPLRYWVDERQNTVVIAEAKGDFVDALFSLLTLPLGTIIRLGNKFEQPVEIGCINNLYQSVQDLLSLNDFWNKMCKEMLLSPRNPLEASCQRLKVNVDDTQPTKYFMCHSCSKSSNLWVSTFDGARCYCGKLMRKEMELLVEEPKEDADGGNSVFVKGDAMFLIHDDLRVLRSSPSDSVPPFVKHRHKDLSKMTEKSQNVGMKEIFSILKQALTSETPLSDVFVPNRESKSSYSFSPDSGPIHWEGSVEIKVIVSKSENKVKFVEADGNFVDFLVSFLTTPLGSILNLMNGKLSLGSIDNLYTSVKKLNPSWFKGSSNKSLLNPRVAPQFGCKSNPLNALQEEDTPKYWYGTVEDNKGSIRSERKMISKVKNLLRDPADTKLFEPRCFDGAREPAVGFMKRPCLFIVKDDLQVIPITTTSSITHLQQLENVQLDDLEEHWVEIRKAHEALNLLRASLTSKATFTQCLSYKLKKWNCQRCIPFWGWKDKGYEKKKRKKKEKGQGGN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02337 515 PANTHER OS01G0153900 PROTEIN 5 478 IPR007750 -
Cca01g02337 515 Pfam Protein of unknown function (DUF674) 7 455 IPR007750 -
Cca01g02337 515 PANTHER DUF674 FAMILY PROTEIN 5 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02337 Cca-Chr1 51986257 51988784 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02337 - - gmx:102665361 684.871