Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02315 ATGCCGCAAGGGGATTACATTGAGCGTCACCGAAGAGACTATGGCTACCGCCTCGACCACTTCGAGCGCAAGCGCAAGAAAGAGGCTCGTCAAGTTCACAAGCGCTCTGCAATGGCTCAGAAGGCTCTTGGTATTAAGGGGAAGATCATTGCCAAGAAAAACTACGCTGAAAAGGCGCAGATGAAGAAGACTTTGGCCATGCATGAGGAGTCAACTTCGAGGCGCAAGAGTGATGATAATGTTCAGGATGGAGCAGTTCCTGCTTATCTTCTGGACCGTGATAACACGACCAGAGCAAAGGTTCTCAGCAACACTATTAAGCAAAAGAGAAAGGAGAAGGCTGGGAAGTGGGATGTTCCTCTGCCTAAGGTGCGTCCTGTGGCTGAAGATGAAATGTTCAAAGTGGTCCGGTCTGGGAAAAGAAAGACCAAGCAATGGAAGAGAATGGTTACCAAAGCTACATTTGTTGGGCCTGGTTTTACCAGAAAACCTCCAAAGTATGAACGGTTTATTCGTCCAACAGGATTGCGGTTCACTAAAGCTCATGTTACTCATCCAGAACTTAAGTGCACATTCAATCTAGAAATAATTGGAGTAAAGAAAAATCCTAATGGTCCTATGTACACCTCTCTTGGTGTCATTACCAAGGGAACTATAATTGAGGTGAATGTTAGTGAACTTGGTCTTGTCACACCTGCGGGGAAAGTTGTGTGGGGTAAATACGCTCAAGTTACTAATAACCCAGAAAATGATGGTTGTATAAATGCTGTTTTGCTTGTTTAA 783 0.4483 MPQGDYIERHRRDYGYRLDHFERKRKKEARQVHKRSAMAQKALGIKGKIIAKKNYAEKAQMKKTLAMHEESTSRRKSDDNVQDGAVPAYLLDRDNTTRAKVLSNTIKQKRKEKAGKWDVPLPKVRPVAEDEMFKVVRSGKRKTKQWKRMVTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLEIIGVKKNPNGPMYTSLGVITKGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02315 260 CDD NSA2 4 260 IPR039411 -
Cca01g02315 260 PANTHER RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG 3 260 IPR039411 -
Cca01g02315 260 Gene3D - 178 260 - -
Cca01g02315 260 MobiDBLite consensus disorder prediction 62 84 - -
Cca01g02315 260 Pfam Ribosomal protein S8e 35 259 IPR022309 -
Cca01g02315 260 MobiDBLite consensus disorder prediction 62 81 - -
Cca01g02315 260 PANTHER BNAA10G30340D PROTEIN 3 260 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02315 K14842 - gmx:100801671 514.227