Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02298 ATGGAAACACCAACACCCCGGGCTTTGAAAATATATTTCCTCCCATTCTTCGCACAGGGGCACCTAATCCCCCTAGTCCAGCTTGCACGCTTGGTGGCGTCACGTGGCCAGCATGTGACCATCATCACCACCCCCTCCAACGCCCAACTCTTCGACAAAACCCTCGACGACGACGCCGCCGCCGGACACCGCGTCCGCGTCCTCCTGATTGACTTCCCCGCCGCCCAGGTCGGCCTCCCCGCCGGCGTGGAGAATCTCGTGGCCGCCTCCGACAACGACACCGCCTTCAAGATAAGCATGGCGGCGCACCTCATCAAACCCCAAGTGGAGTCCCTCATGAAGCAATCCCCTCCCGATGTGTTCATCCCCGACATCATGTTCACCTGGTCCAAACACTCCGCAAACACTCTCAGCGTCCCGAGACTCGTCTTCAACCCCATTTCAATCTTCGACGTCTGCATGATCCACGCCATTAAGGAAAACCCTCAAGCCTTTCATTCTCACTCTGGACCCTATCACATCCCGGGTCTACCACACGCTCTTACCTTGCCGATAAAACCCTCACCTGGTTTTGCTGTTTTGACTGAAGCTTTGTTGGACGCTGAAGAAGAAAGCCATGGAGTCATCGTAAACAGCTTTGCGGAACTCGACGTGGAGTATACCAAACACTACGAGAATCTCACCGGGAGAAAAGTGTGGCATGTTGGACCTAGTTCCCTCATGGTGCAGAAAACAGTGCCTAGTGTTAAAGGAGATGAACACGAATGCCTGACATGGCTCAACTCAAAGGAAAATGATTCGGTCGTTTACATTTGTTTCGGGAGTTTGTCTCTTATTTCGGATAAGCAGCTTTATGAAATAGCCATTGGACTTGAAGCGTCAGGGCATCAGTTTCTCTGGGTGGTTCATCGGAAAAACAAAGACGAAGGCAACGAAGAAGAAACATGGTTGCCGAAAGGGTTTGAGGAGAGGATGAGGGAGAAAAAGAGAGGGATGCTGATAAAGGGGTGGGCCCCACAGCCGTTGATTTTGAACCACGGTGCTGTTGGAGGGTTTGTGACGCACTGTGGGTGGAACTCGGTGGCGGAGGCTATCAGTGCTGGGGTTCCGATGATAACCATGCCGGGGTTTGGTGACCAGTACTATAATGAGAAGCTGATAACGGAGGTGCATGGGTTTGGGGTGGAGGTGGGCGCAGCGGAGTGGAGCCTGTCGCCGTACGAGAGTAAGAAGAGTGTGGtgagtggggagaggatagagaaggctgtgaggaggctgatggatggtggagaaggtgaggggattagGAAGAAAGCGAAGGAGATGAAGCACAAGGCTTGGAAAGCTGTTAATGAAGGTGGATCTTCTCACAATAGTCTCTTGGATTTGATACAACATCTTAAGAGCTTTGTGCCTAGCCTAGAAAGGGTAGCTAATAACTAG 1443 0.4976 METPTPRALKIYFLPFFAQGHLIPLVQLARLVASRGQHVTIITTPSNAQLFDKTLDDDAAAGHRVRVLLIDFPAAQVGLPAGVENLVAASDNDTAFKISMAAHLIKPQVESLMKQSPPDVFIPDIMFTWSKHSANTLSVPRLVFNPISIFDVCMIHAIKENPQAFHSHSGPYHIPGLPHALTLPIKPSPGFAVLTEALLDAEEESHGVIVNSFAELDVEYTKHYENLTGRKVWHVGPSSLMVQKTVPSVKGDEHECLTWLNSKENDSVVYICFGSLSLISDKQLYEIAIGLEASGHQFLWVVHRKNKDEGNEEETWLPKGFEERMREKKRGMLIKGWAPQPLILNHGAVGGFVTHCGWNSVAEAISAGVPMITMPGFGDQYYNEKLITEVHGFGVEVGAAEWSLSPYESKKSVVSGERIEKAVRRLMDGGEGEGIRKKAKEMKHKAWKAVNEGGSSHNSLLDLIQHLKSFVPSLERVANN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02298 480 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 253 397 IPR002213 GO:0008194
Cca01g02298 480 Gene3D Glycogen Phosphorylase B; 246 448 - -
Cca01g02298 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 468 - -
Cca01g02298 480 Gene3D Glycogen Phosphorylase B; 13 460 - -
Cca01g02298 480 PANTHER GLYCOSYLTRANSFERASE 5 472 - -
Cca01g02298 480 CDD GT1_Gtf-like 9 443 IPR002213 GO:0008194
Cca01g02298 480 ProSitePatterns UDP-glycosyltransferases signature. 337 380 IPR035595 -
Cca01g02298 480 PANTHER GLYCOSYLTRANSFERASE 5 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02298 Cca-Chr1 51459141 51461039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02298 11 467 Glycosyltransferase AT2G15490 40.919 1.55e-117 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02298 - K23260 gmx:100793313 718.383