Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02272 ATGAAGATGAAGATCAACAAAGCCTGCGATCTCTCCTCCATCTCCGTCTTTCCTCCTCCTCTCGTTTATCCAAGGAAAGGGAACAACGTGTCAAGCGGATTGCAAGTGTCTCACTCTCAGCATCGCTCGCAACCGTCTCAGCAGTCGCTTTCTCAGGGACTCTCCTCTCAGCACGGAATTTTGTCTCATTTCTCTCAGAACTCTCTCGACGAGGCCGTCACGACTAATGATCAGAGAATTGGTTCTCAAGAACATGAGAACTCTTTGAGGAGGCTTTCTAGCTTGCCCCGAGCTACATATTCGCGGGAAGAGAGTCAACAACCTAACTCGAGATCTTCGTCCAATCTAATGATTAAATGGAATTCTGCAGAACATAAAAGTCAGTTAAGTGAAGGACTTGAACACCGAATTGGCATAATGGAAACAACATTGAGTAGGTTTGCAATGATCCTGGATTCTGTTCAAAGTGACGTAATGCAAGTAAACAAAGGAACAAAGGAAATTATTTTGGAGATGGAATTCATTAGGCAGAAGTTGATTGCACAGGATAACTCGCTTCAGTTAATGACTAAAGGACAAGAAGAAATTAAAGCAATCATTGATGGGAGCTTGAAATCTTTATCTGAACAAATGAGCCATGTTTCAAAGAAAGAGAAATTACAGGAAGTATGTTTGGCGGTTTCTGCGTTGCCTCAACTAATCGAAGCCTCTCAGCAAAATGTACAAAATGATCTCCGTGACATCAACAAGGAAATGAAGGAAATTTCTTGCATTCTGAAAAGCGTCAACCAAAAGGATCTGGCGCCACGTACTTTGTCTTCAAAGAGGGTTAGCAAACGGGTTACCACACCGAAAAGGCGTCAGCCTCTTGCTAAGTGTGAGGCGAAGAATATACGAGCTACTGTAGCTCCAGAGATAAAAGTGGGCGTTTGGAAGCCAGTAAAAAGAGAAAGAGTCGTTTTTTCAGATAAAACATCTGAAAAGGTGCAAAAGAAAAAAGAACCACACACTGAGAAGTATATGAGGGGAGGTAGAGACTGTGCTATTGTCATTGAATCTGATGAGGAGACTGAAGGTTTTTCCTGCTTGGTCGGTGAAAACGCAGACCTATTTGGGAAATTGACGAAAGAAGAAGAGGAAGAAACTGAGCGAATTTTGCGGAAAGCAAGGAGGCGCAAGAGGAAAAGTATAGTAATACTATAA 1203 0.4239 MKMKINKACDLSSISVFPPPLVYPRKGNNVSSGLQVSHSQHRSQPSQQSLSQGLSSQHGILSHFSQNSLDEAVTTNDQRIGSQEHENSLRRLSSLPRATYSREESQQPNSRSSSNLMIKWNSAEHKSQLSEGLEHRIGIMETTLSRFAMILDSVQSDVMQVNKGTKEIILEMEFIRQKLIAQDNSLQLMTKGQEEIKAIIDGSLKSLSEQMSHVSKKEKLQEVCLAVSALPQLIEASQQNVQNDLRDINKEMKEISCILKSVNQKDLAPRTLSSKRVSKRVTTPKRRQPLAKCEAKNIRATVAPEIKVGVWKPVKRERVVFSDKTSEKVQKKKEPHTEKYMRGGRDCAIVIESDEETEGFSCLVGENADLFGKLTKEEEEETERILRKARRRKRKSIVIL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02272 400 Coils Coil 245 265 - -
Cca01g02272 400 MobiDBLite consensus disorder prediction 75 115 - -
Cca01g02272 400 PANTHER RECOMBINATION INITIATION DEFECTS 3-RELATED 1 396 - -
Cca01g02272 400 MobiDBLite consensus disorder prediction 28 57 - -
Cca01g02272 400 PANTHER RECOMBINATION INITIATION DEFECTS 3-RELATED 1 396 IPR034546 GO:0048236|GO:0070192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02272 - - gmx:102667739 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02272 01 51053660 51059747 Cca01g02272 01 51053660 51059747 ECH