Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02270 atggcgctggttgtgatctgtgggcagccaagcagtgggaagtccaaagctgccatttttctggctgaagctctgaaagaatcagaatcaaagcttcaagtgaggatcatagatgaagcatgctttcatcttgatcgaaaccaaagctacgcgaacatgccttcggagaagaatctaagaggGGTGCTCAGGTCAGAAGTGGATAGGTCCCTATCCAGAGACAGCATCATCATAGTGGATTCCTTGAACAGCATCAAGGGCTACCGGTACGAGCTATGGTGCTTGGCTCGCGCTGCCGGGATCAGATACTGTGTGCTTTACTCTGATGTTGAGGAAACCGTTTGTAGGAAGTGGAATGAGGATCGCAGGGAGAAAGGAGAAGCCTGTTATGATGATTCAATATTTGAGGATTTGGTGAGAAGGTTTGAGAAACCAGATAGGAAAAACAGGTGGGATTCTCCGTTATTTGAATTGTGGCCACACAGAGAAGGGATAGAGAAATCTTCCCCTGCCATTGTAGATGCTGTCTCGTATTTGACCAAAAAGGTGGACTCCAAAACCCGGGATGTGAAGATATTGCAGCCAACTATTGCAACTCAAACCACTCGTTTTTCTGATGCAAATTCTCTCTATGAGTTGGACAAGGCAACACAAGAGGTCACAAATGCTATAGTAGAGGCACAATCTCATGCTCTTGGTGGACCACTCAATGGAGTTTCTGTAGGGAAGGATTTGCCTACAGTCAACATTTCAAGGGCTGTTGGGCTGCCAGAGCTTCGCAGGATGAGACGAACCTTCATAAAGTTGACAGGGCAAACGAGTTTAAGTGGGCCACCTCCTCCTTCTGATTCTGAGAGTGCAAAAAGAATGTTCATTGATTACTTGAACAGGGAGCTAGGAACATCCTGA 909 0.3696 MALVVICGQPSSGKSKAAIFLAEALKESESKLQVRIIDEACFHLDRNQSYANMPSEKNLRGVLRSEVDRSLSRDSIIIVDSLNSIKGYRYELWCLARAAGIRYCVLYSDVEETVCRKWNEDRREKGEACYDDSIFEDLVRRFEKPDRKNRWDSPLFELWPHREGIEKSSPAIVDAVSYLTKKVDSKTRDVKILQPTIATQTTRFSDANSLYELDKATQEVTNAIVEAQSHALGGPLNGVSVGKDLPTVNISRAVGLPELRRMRRTFIKLTGQTSLSGPPPPSDSESAKRMFIDYLNRELGTS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02270 302 Gene3D - 1 190 IPR027417 -
Cca01g02270 302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 148 IPR027417 -
Cca01g02270 302 PANTHER UNCHARACTERIZED 1 300 IPR045106 GO:0002098|GO:0006357
Cca01g02270 302 PANTHER BNAC08G40070D PROTEIN 1 300 - -
Cca01g02270 302 MobiDBLite consensus disorder prediction 269 288 - -
Cca01g02270 302 Pfam Chromatin associated protein KTI12 1 296 IPR013641 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02270 K15456 - gmx:100797135 559.681