Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02255 ATGTACCACCATCACAGAATTCAGATCAAACCCCCAACCCTCTCTTCCCTCTTCTCCCCAAAATGCCCTCTCAGGCTCCCTCTTCTGCCTTCCACCTCCAGGCCCAACAAGGCCCCCATCCGGGcctccctccctcccccctcctcctcctcctccGGCCCAGCCCAAACCCTAATCTCCCTCCTCCGCTCCGTCCCGGACTGGGCCGACGCGGTGCAGGAGCGGGGCATGCAGAAGAAAAGGTCCCTCTACACGCACCTCAACTGGCGCGACCACCGCAGCTCcctccgccacctccgccacctcctctccagcctctcctcccgcgtcatcctctccctcgtcccccccgtcctcttcttcaccgccttcgccgccgccatcgctgcctacaactccgccctcctcctccacctcctccccgacttcctccccctcctccgggcctccaccctcccctaccagctcaccgcccccgccctcgccctcctcctcgtcttccGCACCGAAGCCTCCTACGCCCGATTCGTCGACGGCAAGAAGGCCTGGACCAACGTCATCGCCGCCACGCACGACTTCGCCAGACAGGTCGCCGCCATCGTCGTCGACAACGCCGACGACTTCCCCATCAAGCACGCCCTCTTGCAGTACATCGCCGCTTTCCCCGTTGCGCTTAAGTGTCACGTGTTGTATGGTTCGGATATTAGGAGGGATCTTCAGCATATGCTGGAAGTGGATGATCTAGCTGTGGTCATGAATTCCAAGCACCGGCCTCATTGCATTATTGAGTTTATTTCACAGAGCATTCGGTTGCTGAAACTGGAGGATTCTAGAAGGAATGTTCTGGAGTCAAAGATATCTTGTTTCCATGAAGGAATTGGCATATGTGAACAACTTATGGGTATTCCCATTCCGTTATCATATACTCGCTTGACCTCAAGGTTTCTTGTCCTGTGGCATCTGACGCTCCCTATCATACTTTGGGATGATTGTCAATGGATTGTGGTTCCTGCTACTTTTATTAGTGCTGCATCTTTGTTTTGCATTGAAGAAGTTGGAGTTCTTATAGAGGAGCCATTTCCCATGCTTGCACTTGATGAACTCTGCCAAAAGGCGCACACAGACATCCAAGAAGCAATCACAACTGGAAATTTAATTCATGCGCGCCTTGTTGCAAAGCAAAATAGCCTCTCTGAAGAGCATTCACCGAATGGCTGGCCTAACTCCTAG 1230 0.413 MYHHHRIQIKPPTLSSLFSPKCPLRLPLLPSTSRPNKAPIRASLPPPSSSSSGPAQTLISLLRSVPDWADAVQERGMQKKRSLYTHLNWRDHRSSLRHLRHLLSSLSSRVILSLVPPVLFFTAFAAAIAAYNSALLLHLLPDFLPLLRASTLPYQLTAPALALLLVFRTEASYARFVDGKKAWTNVIAATHDFARQVAAIVVDNADDFPIKHALLQYIAAFPVALKCHVLYGSDIRRDLQHMLEVDDLAVVMNSKHRPHCIIEFISQSIRLLKLEDSRRNVLESKISCFHEGIGICEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCQWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCQKAHTDIQEAITTGNLIHARLVAKQNSLSEEHSPNGWPNS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02255 409 PANTHER BESTROPHIN/UPF0187-RELATED 15 406 - -
Cca01g02255 409 MobiDBLite consensus disorder prediction 28 55 - -
Cca01g02255 409 Pfam Bestrophin, RFP-TM, chloride channel 92 369 IPR021134 GO:0005254
Cca01g02255 409 PIRSF UCP016988 13 409 IPR024701 GO:0005247|GO:0042548
Cca01g02255 409 PANTHER UPF0187 PROTEIN YNEE 15 406 IPR044669 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02255 K08994 - gmx:100786921 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02255 01 50798502 50802212 Cca01g02255 01 50798502 50802212 ECH