Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02246 ATGTACACAACATACAACTGTTCTCCAGCAGTGTCAAGTCACACCAAGGCTCAACTCACACTCAATAGTTTTGAAAAGCGTGGAGATGGAGGTGGCCCTTCAGCATGTGACAACCAGTACCATTCTGATGACACACCAGTAGTTGCACTCTCCACTGGATGGTTCAACAACATGAGTAGGTGTCTCCACAACATCACCATCACTGCAAATGGGAAGAGTGTGCAGGCCATGGTGGTGGACGAGTGTGACTCCACCATGGGATGTGATCAAGACCATGATTATCAACCTCCTTGTTCCAACAACATTGTCGATGCCTCCAAGGCTGTCTGGAAAGCCTTAGGTGTGCCTCACAGTCAATGGGGTGGATTACAAATTACTTGGTCTGATGCTTAA 393 0.4758 MYTTYNCSPAVSSHTKAQLTLNSFEKRGDGGGPSACDNQYHSDDTPVVALSTGWFNNMSRCLHNITITANGKSVQAMVVDECDSTMGCDQDHDYQPPCSNNIVDASKAVWKALGVPHSQWGGLQITWSDA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02246 130 SUPERFAMILY Barwin-like endoglucanases 10 128 IPR036908 -
Cca01g02246 130 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 1 130 IPR039271 -
Cca01g02246 130 PANTHER LIPID TRANSFER PROTEIN 1 130 - -
Cca01g02246 130 Gene3D - 14 129 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02246 Cca-Chr1 50659953 50660345 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02246 - - gmx:100792850 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02246 01 50659953 50660345 Cca01g02246 01 50659953 50660345 ECH