Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02234 ATGGCGTGTTCTGAGGAGAGGAGTTGGGGCCAAAGGGTATCCGAAAAGGTTGTTTCTTTGTACGCTTCTCTTCCCAAAAAGGGCAAACCTCAAGGCCGTGAAGTCACCGTTTTGGCCTCTTTCCTTCTCTCTTCTCCTTCCAATGATTTGAAGGTTGTTGCAATGGGAACGGGTACAAAGTGCATTGGACGTTCTCTCTTGCGCCCCTCTGGTGACATTGTTCATGATTCCCATGCTGAAGTCATTGCTCGAAGAGCTTTGATCAGGTTCTTCTATGCACAGATTCAACATCTTACTGAAACTAGTTGTAAGCATGAAACTAGCAATGGAGGCAAAAGGTTGAAACTTGATGATGGAAACTTGCCATTTGAGTTGGATCCAGGGTGTGTTAATAAAGGAAAATATACCTTGAGAAAGGATTGGAAATTACATATGTACATATCACAGTTACCATGTGGAGATGCTTCACTGAGTTCTCTTGTCTCTCCCTTGGAAAATGTGCCTTTAGGAGAAAGTGGTTCAACTTCACCTTTGGATAACAGTTTAAAACAAAAGGGGATGGTCCAGAGGAAGCCAGGTCGTGGTGATACAACCCTGTCAGTTAGTTGTTCTGACAAGATAGCTCGTTGGAATGTTGTTGGTGTTCAAGGAGCTTTGCTTTCCTACTTTCTTCAACCTGTATATCTTTCTTCCATTACTGTTGGTCTTCCTGTTAACAATCCCGAGAATTTTCATTTTGAAGATAACTTGAAAAGAGCTTTGTATGAACGTATCTTACCCTTATCAAATGAACTGACATCTCCATTTATAGTGAACCAGCCGTTATTTCAGGCTGCACCAGTACCACCAAAGGACTTTCAGCAATCTGAGAGTGCTGCCAACACTTTAACATGCGGATATTCCATATGTTGGAATGAATGTGGCTTGCATGAAGTCATCCTGGGAACTACTGGAAGAAAGCAAGGCACCTCTGCAAAAGGGGCACTTTGCCCATCGACACAGTCATCTTTGTGCAAAAAGAGGCTGTTGGAGGTTTTTTTGTCACTCAGGCGGGAAAATTTCACCGGTTCTCTGGACAATGGGATTACGTATCGAGAACTGAAGGATGGAGCTGAAGAATATCATTTGGCTTCCAAAATTTTTAAAGGGAAGCCACCTTTTAACAAGTGGTTCTTGAAACCGTCTGATTGTGAGGCATTCCCCATTTCAGAATAA 1215 0.4272 MACSEERSWGQRVSEKVVSLYASLPKKGKPQGREVTVLASFLLSSPSNDLKVVAMGTGTKCIGRSLLRPSGDIVHDSHAEVIARRALIRFFYAQIQHLTETSCKHETSNGGKRLKLDDGNLPFELDPGCVNKGKYTLRKDWKLHMYISQLPCGDASLSSLVSPLENVPLGESGSTSPLDNSLKQKGMVQRKPGRGDTTLSVSCSDKIARWNVVGVQGALLSYFLQPVYLSSITVGLPVNNPENFHFEDNLKRALYERILPLSNELTSPFIVNQPLFQAAPVPPKDFQQSESAANTLTCGYSICWNECGLHEVILGTTGRKQGTSAKGALCPSTQSSLCKKRLLEVFLSLRRENFTGSLDNGITYRELKDGAEEYHLASKIFKGKPPFNKWFLKPSDCEAFPISE 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02234 404 Pfam Adenosine-deaminase (editase) domain 54 394 IPR002466 GO:0003723|GO:0004000|GO:0006396
Cca01g02234 404 SMART adara_8 8 401 IPR002466 GO:0003723|GO:0004000|GO:0006396
Cca01g02234 404 PANTHER EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN 4 402 - -
Cca01g02234 404 ProSiteProfiles Adenosine to inosine editase domain profile. 54 400 IPR002466 GO:0003723|GO:0004000|GO:0006396
Cca01g02234 404 PANTHER A-TO-I RNA EDITING REGULATOR ADR-1 4 402 - -
Cca01g02234 404 MobiDBLite consensus disorder prediction 171 197 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02234 K15440 - gmx:100789591 708.753