Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02233 ATGGAGAAGGACAACGAGACATATTTGAAGCTCTTCGGTGGTCGTTCTTATAATAACCAGAAGAAGGGCAAAGTCACCACACTTTCCACCACAGTCACTGTGCTGTTTTGCTTTGTAGCCACTTTCTGTGCTTTTGTTTTCTGGAATACGTGGAGTTCCCTTGGAAGCAAGAACATCTCAGCCGTCCACGTAGCCAGGCCGAACGTACAGGAATTTCCCCTGAGATGCGGGAAGTGGCACGTGTGCGGTAGGGAGTACCCGACCACACACAGGCCGAGGAGCAACGGGAGTGGCACGTGCCCGTCGTACTTCCGTTGGATCCACGAAGATCTAAGGGCGTGGAGAGAGAGAGGGATCACGCGGGAGATGGTGGAGGGTGCACGGAGAACGGCGCACATGAGGGTAGTGATCGTGGACGGGAGGGTGTACGTGGACAAGTATAGGAAGTCAATTCAGACCAGAGATGTGTTTACTCTCTGGGGGATCTTGCAACTTGTGAGACTCTACCCTGGGAAGCTCCCTGATTTGGAGCTATTGTTTGATTGCGATGACCGGCCCGTTATCCCAAAAGACAGGTTTCAAGGCCCAAATGCTGCACCCCCACCTTTGTTCCGCTATTGCTCCGACCACTGGAGTTTGGACATTGTCTTCCCTGATTGGTCCTTTTGGGGCTGGGCTGAGATAAATATAAAGCCATGGAAATATGTCCTAGAAGATATCAAAAATGGGAACAAGAAGAGAAAGTGGAAGGACAGAGTACCCTACGCGTATTGGAAGGGTAACCCTTATGTTGCTTCAACTAGGAAAAACCTTTTGCATTGCAATGTCACACAAAAACAGGATTGGAACACTCGCCTATACATACAGGACTGGGAACAAGAGTCCAACCAAGGGTACAAGAAATCCAACTTAGGGGATCAATGCACTCATAGGTATAAGATATACATAGAAGGATGGGCTTGGTCCGTTAGTGAAAAGTACATTTTGGCTTGCGATTCTATGAATCTATATGTTAGGTCTAGGTTCCATGATTTTTTTGTCCGAGGCATGGTTCCCTTGGAGCACTATTGGCCCATTAGAGACAATACCAAGTGCACCTCTCTTAAGTTTGCAGTCGAATGGGGCAACAACCACACTCATGAGGCACAAGCAATAGGTGAGGCTGCTAGCAAATTCATTCACGAGGACATGGACATGGACTATGTATATGATTACATGTTTCATCTACTTAATGAATATGCAAAGCTCCTAAGGTTCAAACCAACTATACCTCGAGGAGCTGTGGAGTATTGTCCTGAAACCATGGCATGTGCTGTAAATGGTACACAAAGGAGATTCATGGAGGAGTCCATGGTGAAGTTTCCTAGTGATTCAAATCCATGCACTATTCCTCCTCCATATGATCCTAAAACCCTACAAGACTTTCTAGATAAAAAGGCTAATTCAATAAGACAGGTAGAAACATGGGAAGATGAATATTGGGAGAAGAAAAACAAGGAACAATGA 1506 0.4635 MEKDNETYLKLFGGRSYNNQKKGKVTTLSTTVTVLFCFVATFCAFVFWNTWSSLGSKNISAVHVARPNVQEFPLRCGKWHVCGREYPTTHRPRSNGSGTCPSYFRWIHEDLRAWRERGITREMVEGARRTAHMRVVIVDGRVYVDKYRKSIQTRDVFTLWGILQLVRLYPGKLPDLELLFDCDDRPVIPKDRFQGPNAAPPPLFRYCSDHWSLDIVFPDWSFWGWAEINIKPWKYVLEDIKNGNKKRKWKDRVPYAYWKGNPYVASTRKNLLHCNVTQKQDWNTRLYIQDWEQESNQGYKKSNLGDQCTHRYKIYIEGWAWSVSEKYILACDSMNLYVRSRFHDFFVRGMVPLEHYWPIRDNTKCTSLKFAVEWGNNHTHEAQAIGEAASKFIHEDMDMDYVYDYMFHLLNEYAKLLRFKPTIPRGAVEYCPETMACAVNGTQRRFMEESMVKFPSDSNPCTIPPPYDPKTLQDFLDKKANSIRQVETWEDEYWEKKNKEQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02233 501 SMART cap10 172 420 IPR006598 -
Cca01g02233 501 PANTHER GLYCOSYLTRANSFERASE 21 497 - -
Cca01g02233 501 Pfam Glycosyl transferase family 90 98 490 IPR006598 -
Cca01g02233 501 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 21 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02233 Cca-Chr1 50527329 50531038 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02233 - - gmx:100790123 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02233 01 50527329 50531038 Cca01g02233 01 50527329 50531038 ECH