Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02210 ATGGGTTCGAAAGGGAAAGCAGAGAGTGTGTGCGCCTCGCCATGGCTGAAAGTCTCGAAGGAAGTTAACCCCAAATGTGCTTCCAACACCTTGCACTTCGTTGAAGCTATGGGGGCTGCAATTCCTGTACCTCGTAACTGCAATGCGCGTGGCTTCTACGACCACTTCCTTAGGAACTTCATCAAGGTCGATCACATCGAACGTGGACGAATCCAATGCACTCTTCTCGCCAAACCACCCATCTGCAATGGCTATGGAACTCTGCATGGAGGGGCTGTTGGGTCCTTGGTTGAGATTCTGTCTACTGCTTGTGCTAGAACTATAGTTGCTGAAGACAAGGAGCTTTTTCTTGGGGAAATGAACACTTCTTACCTCTCTGCCACTCCAGCAAATGAAGAAGTGCTAGCTAATGCCGCTGTCGTGAAGTCTGGAAGAAATTTGACTGTTGTTGCAGTTGAGTTTAAACTGAAGAAAACTGGGAATTTGCTCTATATTACTCATGCTACCTTCTATAACATGCCAGCTTCCAGTTTATGA 537 0.4693 MGSKGKAESVCASPWLKVSKEVNPKCASNTLHFVEAMGAAIPVPRNCNARGFYDHFLRNFIKVDHIERGRIQCTLLAKPPICNGYGTLHGGAVGSLVEILSTACARTIVAEDKELFLGEMNTSYLSATPANEEVLANAAVVKSGRNLTVVAVEFKLKKTGNLLYITHATFYNMPASSL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02210 178 PANTHER OS07G0462700 PROTEIN 15 178 - -
Cca01g02210 178 CDD PaaI_thioesterase 61 171 - -
Cca01g02210 178 Pfam Thioesterase superfamily 85 159 IPR006683 -
Cca01g02210 178 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 15 178 IPR039298 GO:0047617
Cca01g02210 178 TIGRFAM unchar_dom_1: uncharacterized domain 1 61 153 IPR003736 -
Cca01g02210 178 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 61 171 IPR029069 -
Cca01g02210 178 Gene3D Hotdog Thioesterase 43 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02210 Cca-Chr1 50244146 50252393 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02210 K17362 - gmx:100499764 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02210 01 50244146 50252393 Cca01g02210 01 50244146 50252393 ECH