Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02204 ATGGAGGCAAAACCACACGCACGTACCATAGAGATCACCGTTGTGTCGGGACAAAACATAAATTTTGATCGAAGTTCAGTGGCTGAGAACGTGTATGTTGTTGTTCGTGCTGAGTCTCTCAAATGTTGCACCACCAAAATGGTGAATGAAGATGCGGGTTTGCATGCATGGAATGAAAAGTTCATGTTAGACATTCCTTCACATGCAAGGTCAATCACGTTTGAGGTGCAATGCAAGAAGTATAAAGGAGTTCGCCCTATTGGGGTAGCAAGGATAGCACTTTCGGATTTTCTTAGCGACAATAATAAAGTTGTGTCAGAAAGTGTTCCTCAAATGTTGTGTTACGGTTTGAGGAATTGGGAAGGTCGACGAAATGGGGTTATACGTTTCTCGGTGAGGGAGGTGACACCTACGGATCATAATTTGTGTTTGGAAACAAAAGACATAAAGACTGTGAGTTCTAGAGGATCTGAGCATGAAGTTATGGGGTTTCAAGTGGACCCCAAGAAATCAAGTCATTTTGTCATTGGCATTCCAGTTTCGTGGAGTTACCAAAGTGTTAATATGTGA 570 0.4228 MEAKPHARTIEITVVSGQNINFDRSSVAENVYVVVRAESLKCCTTKMVNEDAGLHAWNEKFMLDIPSHARSITFEVQCKKYKGVRPIGVARIALSDFLSDNNKVVSESVPQMLCYGLRNWEGRRNGVIRFSVREVTPTDHNLCLETKDIKTVSSRGSEHEVMGFQVDPKKSSHFVIGIPVSWSYQSVNM 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02204 189 PANTHER INGRESSION PROTEIN FIC1 7 186 - -
Cca01g02204 189 SMART C2_3c 9 106 IPR000008 -
Cca01g02204 189 Gene3D C2 domain 8 147 IPR035892 -
Cca01g02204 189 CDD C2_SRC2_like 9 130 IPR044750 GO:0006952
Cca01g02204 189 PANTHER C2 DOMAIN PROTEIN 7 186 - -
Cca01g02204 189 Pfam C2 domain 9 102 IPR000008 -
Cca01g02204 189 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 138 IPR035892 -
Cca01g02204 189 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02204 Cca-Chr1 50186635 50187288 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02204 - - gmx:100810274 283.108