Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02166 ATGGGAGATCAAGCGGAGGGAACGGTCCAGAACGTTCTAGAACAGGAGTCGCTGAAGTGGGTCTTCGTGGGCGGCAAGGGCGGCGTGGGCAAAACGACATGCAGCTCAATCCTCTCCATTCTCTTCTCCACCGTTCGCTCCTCCGTCCTCATCATCTCCACCGACCCCGCCCACAACCTCAGCGACGCTTTCCAGCAACGCTTCACCAAAACCCCCACTCTCGTCAACGGCTTCTCCAACCTCTACGCCATGGAGGTCGATCCCACCGTTGAACACGAGGATGTGGGCGGCTCCGATGGCATGGACAGTTTGGTCTCCGAGCTCGCCGGTGCCATTCCCGGAATTGACGAGGCCATGAGCTTCGCTGAGATGTTGAAATTGGTGCAGACAATGGATTATTCTGTTATTGTATTTGATACTGCTCCCACTGGCCATACACTTAGACTGTTGCAATTCCCATCGGTTTTAGAAAAGGGTCTTGCAAAAATGATGTCTTTGAAAAATAAATTTGGTGGCTTGTTTAATCAGATGACTCGCATGTTTGGAATGGGTGAGGACTTTGGAGATGATGCAATTCTTGGGAGGCTTGAAGGCATGAAGGATGTAATTGAACAAGTTAATAAGCAATTCAAAGATCCAGACATGACAACCTTTGTCTGTGTGTGTATTCCCGAATTTCTCTCTCTATACGAAACAGAAAGATTGGTTCAGGAACTTACAAAGTTTGAAATTGACACGCACAATATCATCATCAATCAAGTAATCTTTGATGATGAAGATGTTGAATCCAAGTTACTCAAAGCAAGAATGAAAATGCAACAGAAATATTTGGACCAGTTTTACATGCTGTATGATGACTTTAACATTACGAAGCTGCCATTGCTCCCAGAAGAGGTTACTGGGGTTGAAGCTCTCAGATCATTTTCAAGACATTTTACATCACCATATCAACCCTTATCTAGTACAGTAAACCAAGTAGAACGGTTAGAGCGTAAAGTAGCAGCACTAAAATGCCAGTTACATGATGCGGAAGAAGAATTGGAGAGACTCAAACAGGCTTGA 1062 0.4548 MGDQAEGTVQNVLEQESLKWVFVGGKGGVGKTTCSSILSILFSTVRSSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMEVDPTVEHEDVGGSDGMDSLVSELAGAIPGIDEAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSVLEKGLAKMMSLKNKFGGLFNQMTRMFGMGEDFGDDAILGRLEGMKDVIEQVNKQFKDPDMTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVIFDDEDVESKLLKARMKMQQKYLDQFYMLYDDFNITKLPLLPEEVTGVEALRSFSRHFTSPYQPLSSTVNQVERLERKVAALKCQLHDAEEELERLKQA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02166 353 Coils Coil 319 353 - -
Cca01g02166 353 Hamap ATPase <gene_name> [GET3]. 5 320 IPR027542 GO:0005524|GO:0016887
Cca01g02166 353 PANTHER ATPASE LOC107826790 3 352 - -
Cca01g02166 353 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 3 352 IPR016300 GO:0005524|GO:0016887
Cca01g02166 353 CDD ArsA 34 309 - -
Cca01g02166 353 TIGRFAM GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 22 310 IPR016300 GO:0005524|GO:0016887
Cca01g02166 353 Pfam Anion-transporting ATPase 19 311 IPR025723 -
Cca01g02166 353 Gene3D - 1 328 IPR027417 -
Cca01g02166 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 308 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02166 Cca-Chr1 49588148 49593793 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02166 K01551 - gmx:100816517 639.032