Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02151 ATGGCTTCCGACAGCCAGGTGACTCTATCCCCGCCCCATTCCCTTCTCCCCCTCCCAGTCCCACCGCACGCCTTCCAAAACGACGTCGCTCCGCCCGCCTTCTCCGTCGGGACCTTCCTCCGCCAGCGCAGCACCCACCTCTCCGCCGCCATCGTCAAGCGCGTCTCCTCGCTCCGCCAATCCCTCCAAGACGATCACCACAATCGCCAAGTCACCGAGTTCAACCTCTCCGGCGTCAAGGTCGTCGCCACGCCGAAGCCGGAGAAGGAACCGTCGCCAAAAGGACGCGTCACCTTCTTCTCGAGGTCCCACTGCAGAGACTGCACCGCGGTGCGGAGCTTCCTCAAGGAGAAGCGATTGCGCTTCGTCGAGATAAACGTCGACGTTTTCCGCGAGCGGGAGAGGGAGCTGCGAGAGAGGACGGGGACCGCCTCCGTACCGCAGATTTTCTTCAACGAGACCTTCATCGGAGGCCTCGTCGCGCTCAACTCGCTTAGGAACAGCGGCGAGTTCGACCGGAGGGCGGCGGAGATGCTCGCCGGGAAGCTCGCCGGCGACGACGCGCTGTTGCCGCCGGCGTACGGCTTCGATTGCCCCGAGGAGGATCGCGCCGACGAGTTGGTTGCGGCGGTTAGGGTTTTGCGGCAGAGGTTGCCGATTCAGGACCGGTTGAAGAGGATGAAGATGGTTAAGAATTGCTTCGAAGGGAACGAGTTGGTGGATGCGCTCGTTCACCACTTCGATTGCGCGCGTAACGAGGCTGTTGAAATCGGGAAAGAATTGTCCAGGAAGCACTTCATACATCATGTTTTCGGGGAAAATGATTTTGAGGAGGGAAATCACTTATATCGTTTCCTTGAGCATGAACCCTTTATCCCCAGATGCTTTAATTTTCGCGGTAACACAAATGATAATGAGCCAAAGGCTGCAGCTGCAATATGCTTGAGGCTTACCAAGATTATGTCTGCCATTCTTGAGTCTTATGCCTCTGATGATAGGCAACATGTTGATTATGAGGCCATTAGTAAAAGCGAAGAATTTCGTAGGTACGTAAATATGACTCAGGATTTGCAGCGAGTGAATCTTTTGGAACTATCAGAAAACGAGAAGCTTGCTTTCTTCTTAAATTTATATAATGCTATGGTCATCCATGCTGTTATTAGCGTAGGGTGTCCAGAAGGTGTAATTGATAGGAGATCCTTCTTCAGTGATTTCCAGTATTTGATTGGAGGGCATCCTTATTCTCTAAATATTATTAAAAATGGTATTCTTAGATGCAATCGGAGGTCACCATACTCCTTAGTAAAGCCCTTTAGCACAGGAGACAAGCGGTTAGAGGTTGCTCTTGTCAAGTTTAATCCTTTATTTCATTTTGGACTTTGTAATGGTACAAAGTCCAGCCCAAAGGTTAGGTTCTTCTTACCACATAGAGTTGTAGATGAATTAAGAGGTGCTGCAAGAGAGTTCTTTGAGAACGATGGAATTGAAGTGGACCTGGAGAAGAGAACTGTTCATCTTACTAGGATTTTCAAGTGGTTCAGTGGGGATTTTGGACAAGAGAAAGAAATATTGAAGTGGATAATTAATTACTTGGATCCAAATAATGCCGGTCTTGTGACACATCTCTTGGGAGATTATGGACCAGTTTATGTCTCTTACCAGAATTATGATTGGTCAATAAATTCTTGA 1689 0.4962 MASDSQVTLSPPHSLLPLPVPPHAFQNDVAPPAFSVGTFLRQRSTHLSAAIVKRVSSLRQSLQDDHHNRQVTEFNLSGVKVVATPKPEKEPSPKGRVTFFSRSHCRDCTAVRSFLKEKRLRFVEINVDVFRERERELRERTGTASVPQIFFNETFIGGLVALNSLRNSGEFDRRAAEMLAGKLAGDDALLPPAYGFDCPEEDRADELVAAVRVLRQRLPIQDRLKRMKMVKNCFEGNELVDALVHHFDCARNEAVEIGKELSRKHFIHHVFGENDFEEGNHLYRFLEHEPFIPRCFNFRGNTNDNEPKAAAAICLRLTKIMSAILESYASDDRQHVDYEAISKSEEFRRYVNMTQDLQRVNLLELSENEKLAFFLNLYNAMVIHAVISVGCPEGVIDRRSFFSDFQYLIGGHPYSLNIIKNGILRCNRRSPYSLVKPFSTGDKRLEVALVKFNPLFHFGLCNGTKSSPKVRFFLPHRVVDELRGAAREFFENDGIEVDLEKRTVHLTRIFKWFSGDFGQEKEILKWIINYLDPNNAGLVTHLLGDYGPVYVSYQNYDWSINS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02151 562 Pfam Glutaredoxin 97 156 IPR002109 -
Cca01g02151 562 Pfam Protein of unknown function, DUF547 364 489 IPR006869 -
Cca01g02151 562 PANTHER DISHEVELLED/EGL-10/LECKSTRIN DOMAIN PROTEIN 7 562 - -
Cca01g02151 562 Gene3D - 202 344 IPR036388 -
Cca01g02151 562 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 7 562 - -
Cca01g02151 562 CDD DEP 206 284 - -
Cca01g02151 562 Gene3D Glutaredoxin 91 177 - -
Cca01g02151 562 ProSiteProfiles DEP domain profile. 214 287 IPR000591 GO:0035556
Cca01g02151 562 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 218 285 IPR000591 GO:0035556
Cca01g02151 562 SUPERFAMILY "Winged helix" DNA-binding domain 205 311 IPR036390 -
Cca01g02151 562 ProSiteProfiles Glutaredoxin domain profile. 85 182 - -
Cca01g02151 562 SUPERFAMILY Thioredoxin-like 90 173 IPR036249 -
Cca01g02151 562 SMART DEP_3 214 287 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02151 Cca-Chr1 49329037 49335980 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02151 - - gmx:100810111 921.768