Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02150 ATGGCGCCGAAGCGAGCCAAGGGATCGTGTTTTCCCGTCCTCGCTTTCGTTCTCCTCTGCGTTCTCGCGCCGCCGCTTTTCTTCCTCGCTCGGGGGCTCTACACTGCGGATCATGATTATATTTCAGATGTTCCCAGTAAACAGGTTAGCAAATGGAGAGAATGGCAGGCATTGCAAGACCTTAAATCCATTTTTTCGGAAGAGGTTCTTGATGTTATTGCATCCAGCACAAATGATATGGGGCCTTTCAGTCTTGACAATTTCAAAAAAAATTTGTCTGCTTCATGGAGAGTTGTTGGATTAGAAACTGCAAACACTAGATTTGAGCTAAACCAACCTACAACACATGCTAGACAAGAAAAGCTAAAGGTGAAGGAAGGCAGACCTTCAGTTGGCCTTGCTCAGTGGACTGATACTCCGGCTCAGCAAACCCGAAGGCATTTAATAGAGAAAAGGCGGGAAAAACGTGCTGCCGAGTTGGTAAAAATGGATAATGAAGTAACTGTAAAGCTTGAAAATGCTGCCATTGAACGCTCAAAATCTGTTGAGTCAGCTGTTCTAGGTAAATACAGTATTTGGAGGAAAGAAATGGAGAATGAAAATGGTGATTCTACTGTTCGGTTAATGCGGGATCAGATCATTATGGCTAGGGTATATTTAAGCATTTCAAAGATGAAGAACAAGGTTGAACTGTATCAAGAACTAAATTCCCGGGTCAAAGAGAGTCAACGGGCTTTAGGTGATACAATTTCCGATGCAGATCTACATCACAGTGCGCATGAGAAAATAAAGGCTATGGGTCAAGTTCTCTCAAAAGCAAGAGAGCTATTGTATGACTGCAAGTTGGTCACTGGAAAACTAAGAGCAATGCTACAAACAGCTGATGAGCAAGTTAGGAGTTTGAAGAAACAGAGCACATTCCTCAGTCAGTTGGCTGCTAAGACCATACCAAATGGAATTCATTGCTTATCTATGCGCCTTACCATAGATTACCACCTCCTTCCTCCTGAAAAGAGAAAGTTCCCTAGGAGTGAGAATTTGGAGAATCCCACTCTTTATCATTATGCACTGTTTTCGGACAATGTCTTGGCTGCGTCTGTTGTTGTCAACTCAACTATTACGAATGCAAAGGATCCTTCCAAACATGTTTTTCACCTTGTTACTGATAAACTAAATTTTGGAGCCATGAACATGTGGTTTCTTTTGAACCCTCCTGGAAAAGCTACAATCCATGTTGAAAATGTTGATGATTTTAAGTGGTTGAATTCATCCTACTGCCCAGTCTTGCGGCAGCTTGAATCTTCTACTATGAAAGAGTATTATTTCAAGGCGGGCCATCCAACCACACTTTCTTCCAGCGCTTCCAATCTGAAGTATAGAAATCCAAAATATCTCTCGATGCTCAACCATCTGAGATTCTATCTTCCACAAGTCTATCCAAAATTGGATAAAATCCTATTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACTGGATTATGGAGTGTGGATCTTAATGGGAAAGTAAATGGTGCAGTTGAAACTTGTGGTGAGAGCTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCGCATATTGCAAGAAGTTTTGATCCAAATGCTTGTGGTTGGGCATACGGGATGAACATATTTGATCTGAAGGAGTGGAAAAAGAAGGACATTACAGGCATTTATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTAGGGACATTACCTCCAGGGCTAATGACATTCTATGGTCTGACGCATCCGCTAGACAAATCATGGCATGTACTTGGTTTGGGTTATAATCCTAGTGTAGATCGATCAGAGATTGATAATGCAGCAGTTGTACACTACAATGGTAATATGAAGCCATGGTTAGAAATCGCAATGACGAAGTATCGGTCTTACTGGACCAAATATGTCAAGTACAGTCATCCCTATCTTCGGAACTGTAAGCTAAATGAATAG 1995 0.415 MAPKRAKGSCFPVLAFVLLCVLAPPLFFLARGLYTADHDYISDVPSKQVSKWREWQALQDLKSIFSEEVLDVIASSTNDMGPFSLDNFKKNLSASWRVVGLETANTRFELNQPTTHARQEKLKVKEGRPSVGLAQWTDTPAQQTRRHLIEKRREKRAAELVKMDNEVTVKLENAAIERSKSVESAVLGKYSIWRKEMENENGDSTVRLMRDQIIMARVYLSISKMKNKVELYQELNSRVKESQRALGDTISDADLHHSAHEKIKAMGQVLSKARELLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYHLLPPEKRKFPRSENLENPTLYHYALFSDNVLAASVVVNSTITNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDDFKWLNSSYCPVLRQLESSTMKEYYFKAGHPTTLSSSASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWSVDLNGKVNGAVETCGESFHRFDKYLNFSNPHIARSFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLDKSWHVLGLGYNPSVDRSEIDNAAVVHYNGNMKPWLEIAMTKYRSYWTKYVKYSHPYLRNCKLNE 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02150 664 SUPERFAMILY Nucleotide-diphospho-sugar transferases 353 661 IPR029044 -
Cca01g02150 664 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 354 658 IPR029044 -
Cca01g02150 664 CDD GT8_like_1 353 651 - -
Cca01g02150 664 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 5 664 IPR029993 GO:0047262
Cca01g02150 664 Coils Coil 225 245 - -
Cca01g02150 664 Pfam Glycosyl transferase family 8 322 638 IPR002495 GO:0016757
Cca01g02150 664 PANTHER HEXOSYLTRANSFERASE 5 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02150 Cca-Chr1 49301013 49310652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02150 8 664 Glycosyltransferase AT3G61130 74.130 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02150 K13648 - gmx:100811181 1187.17