Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02149 ATGCTACTCCCTCATCCATCAATGCTAGTTGCACCTCAAAACACCATAGAAAATGACAGACCAAACTTTGATGGACCCTTGATGCTAAACCAATCCAACATACCCTCTCAGTTCATATGGCCTGATCATGAGAAGCCATGCCTAGGAGCACCAGTACTCCACATGCCACCCATTGACATGAAGGGTTTTCTCTCAGGAGATCCACAAGTTGTATCTACTGTTTGTGCACAAGTGAATGAGGCATGCAAGAAGCACGGCTTCTTCCTTGTTGTCAACCATGGTGTGGATACCAAGCTCCTGGCTCAGGCTCATAAGCTCATAGAAGAATTCTTCTCCATGCAACTGCCAGATAAGCAGAAGGTTCAGAGAAAACTTGGAGAACATTGTGGTTATGCTAATAGCTTCATAGGAAGATTCTCCTCCAAACTTCCTTGGAAGGAAACACTTTCTTTCCATTATTCTGATGATAAATCCAAAAAAACTGTGGAGGACTATTTTGTAAATGTCATGGGGGAAGACTACAGGCAATTTGGGAGAGTGTTCCAAGAATACTGTGAAACCATGAGCAATCTCTCACTTGAGATCATGGAGCTTCTGGGGATGAGCCTAGGAGTTGGAAGGGAATGTTTCAGAGAGTTCTATGAAGGAAATGAGTCGGTTATGAGGTTGAATTACTACCCACCATGCCAGAAACCAGAGCTAGCTTTAGGAACTGGACCTCATTGTGACCCTACATCCCTAACCGTTCTCCACCAAGATCAAGTCGAGGGCCTCCAAGTCTTTGTCGATGGAAGATGGTACTCTGTCGCTCCTAAAGAAGATGCTTTCGTTGTCAACATTGGCGACACATTTATGGCTCTATCAAATGGGATTTTCAAGAGTTGCTTGCATAGAGCAGTTGTGAACAACAAGATTGTGAGAAAATCACTAGCTTTCTTCTTATGTCCAAATAAAGACAAAGTGGTTACCCCTCCAAAGGAATTAATCACCATCGAGAATCCAAGAACATACCCAGATTTCACTTGGCCAAGTCTTCTTGAGTTCACACAGAAACATTACAGGGCAGACACAGACACTCTTGTTGCTTTCTCGAGGTGGCTAGAAGAGAAAAACAACTGA 1119 0.4352 MLLPHPSMLVAPQNTIENDRPNFDGPLMLNQSNIPSQFIWPDHEKPCLGAPVLHMPPIDMKGFLSGDPQVVSTVCAQVNEACKKHGFFLVVNHGVDTKLLAQAHKLIEEFFSMQLPDKQKVQRKLGEHCGYANSFIGRFSSKLPWKETLSFHYSDDKSKKTVEDYFVNVMGEDYRQFGRVFQEYCETMSNLSLEIMELLGMSLGVGRECFREFYEGNESVMRLNYYPPCQKPELALGTGPHCDPTSLTVLHQDQVEGLQVFVDGRWYSVAPKEDAFVVNIGDTFMALSNGIFKSCLHRAVVNNKIVRKSLAFFLCPNKDKVVTPPKELITIENPRTYPDFTWPSLLEFTQKHYRADTDTLVAFSRWLEEKNN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02149 372 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 160 IPR026992 -
Cca01g02149 372 PRINTS Isopenicillin N synthase signature 78 95 - -
Cca01g02149 372 PRINTS Isopenicillin N synthase signature 241 262 - -
Cca01g02149 372 PRINTS Isopenicillin N synthase signature 276 302 - -
Cca01g02149 372 SUPERFAMILY Clavaminate synthase-like 24 356 - -
Cca01g02149 372 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 16 368 - -
Cca01g02149 372 Pfam 2OG-Fe(II) oxygenase superfamily 218 316 IPR044861 -
Cca01g02149 372 Gene3D - 27 354 IPR027443 -
Cca01g02149 372 PANTHER GIBBERELLIN 20-OXIDASE 16 368 - -
Cca01g02149 372 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 216 316 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02149 Cca-Chr1 49234449 49237192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02149 13 358 Glycosyltransferase AT5G59530 27.778 6.19e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02149 K05282 - gmx:100775693 674.855