Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02148 ATGGGAAAATGTGGTGCTAAAGTCAAATTCAACAGCTCTCTGTCTCTCACTACCTTTCGCCAGATACGCTCCACTATTCAGTACCACTTTCCACAAGCTCAATCATCAAAAGCAATGGCAGACAAGCACACTGACAATGATACTAAGGAGCTTCAACCACTCCTTGTGTTTGGTCCTCCATTATTGTTCCCAAATTTTGAGGCTCAAAATCTTCACAACTACCATTTTCTCAAAGCTTTCTCCTCAAAACTTCCTCTCCACCAATTCCTCGCCAAGCATAATGTTGAGCCTTCATCCATTCAAGCCATACTCTGCAACCCTTTCCAGAAGGTCTCTGCAGAGGTCATCCGGCTCCTCCCATCACTCAGCATCATTGTGACCACCAGTGCTGGAACTGACCACATAGACTTGGCTGAGTGCAGCCACCGTGGTATTCAGGTTGTCTCTGCTGCAGTAGATCACGCTGAGGATGTTGCTGACATGACTGTGGGGTTGTTGATTGATATCATGTGGAAAATTTCTGCCGCTGATCGATTTGTTAGGAAATGGGGTCATTCTATGCCCTTGAATCTTTCTTTTGGATCCAAGCTAGAAGGCAAGCGAGTAGGGATTGTTGGATTGGGAAAAATTGGTGGAGAAGTTGCTAAAAGGCTTGAGGTCTTTGGTTGCACAATTATGTACAATTCAAGGAACCAGAAGCCCTTTGTGTCCTACCCTTTTTATTCTAATGTTGTTGAGCTTGCTGCTAATAGTGACATCTTTGTGGTTTCTTGCTCATTAAATGAGAAAACAAGGCACATAGTGAACAGGGAAGTGATGTTGGCGTTGGGGAAAGATGGGATTATTGTAAACATTGGACGTGGAGCTCTAATTGATGAGAAGGAATTGGTGCGGTGTTTGATGGAAGGGGAGATAGGTGGTGCTGGCTTGGATGTGTTTGAGAACGAACCTAATGTTCCCAAAGAGCTCCTTCAATTGGATAATGTTGTCCTCTCCCCACATGCTGCTTCAATGACTTCAAATGCTTTAGATATTATGCGTGAACGTGTGTCAGAGTGTCTAGAAGCATTCTTTTCTAGTAAACTAGTGAGAACTCCAGTCTTGGATGACTAA 1113 0.4394 MGKCGAKVKFNSSLSLTTFRQIRSTIQYHFPQAQSSKAMADKHTDNDTKELQPLLVFGPPLLFPNFEAQNLHNYHFLKAFSSKLPLHQFLAKHNVEPSSIQAILCNPFQKVSAEVIRLLPSLSIIVTTSAGTDHIDLAECSHRGIQVVSAAVDHAEDVADMTVGLLIDIMWKISAADRFVRKWGHSMPLNLSFGSKLEGKRVGIVGLGKIGGEVAKRLEVFGCTIMYNSRNQKPFVSYPFYSNVVELAANSDIFVVSCSLNEKTRHIVNREVMLALGKDGIIVNIGRGALIDEKELVRCLMEGEIGGAGLDVFENEPNVPKELLQLDNVVLSPHAASMTSNALDIMRERVSECLEAFFSSKLVRTPVLDD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02148 370 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 49 367 - -
Cca01g02148 370 Gene3D - 155 339 - -
Cca01g02148 370 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 164 336 IPR006140 GO:0051287
Cca01g02148 370 Gene3D - 87 361 - -
Cca01g02148 370 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 49 367 - -
Cca01g02148 370 CDD HPPR 52 359 - -
Cca01g02148 370 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 337 IPR036291 -
Cca01g02148 370 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 99 183 - -
Cca01g02148 370 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 99 367 IPR006139 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02148 Cca-Chr1 49223837 49226865 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02148 - K15919 gmx:100776237 498.049