Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02147 ATGATCTCAAGACAATTAGAGTGTGTGGGAATTAATTGCTCATACAATCCAATAACATATATGGAGCTTCAACCACTCCTTGTCTTGGGCCTTCCATCCATATTCCCAGCATTCGAAACACTAAACTCTCACAAGTACATCTTCCTTAAAGCATTTTCCTCTAAGCTCCCTCTCCTTCAATTCCTAGCCACCAAAAATGTTGCCCCTTCTTCTATTCGTGCCATTCTCTGTGACCCTCGTCAAGCTCTTACTGCCGATATCCTCGGTCTTCTTCCGGCGGTGGGATTTGTTCTCACAACCACTGCCGGAATGGACCACATTGACCTTTCTGAATGTCGTAGACGCGGCATTCAGGTTGTCAGTATCGGCAGTCTAGCTGCCGATGATGTCGCAGACATGGCTATAGGATTGCTGATTGACGTACTATACAAAATTTCCGCTAATAATCGTCGTGTTAGGAAATGTGTTGCTTCTAAACCTTTGAATTTTACTATGGCTCCTAAGCTTGGTGGCAAGAGAGTTGGGATTGTTGGATTGGGAAGCATTGGAGGGGAAGTTGGGAAAAGGCTAGAGGCCTTTGATTGCAAAGTTATGTACCATTCAAGGAACGAGAAGCCATTTGTGCCCTACCATTACTATTCTAACGTTGTTGACCTCGCCACTAATTGCGATGCCCTAGTGGTGTGTTGTCCCTTAACCAAACAAACACGACACATAATCAATAGGGAAGTGATGTTGGCATTGGGAAAAGATGGGGTAATCGTGAACGTGGGACGAGGACCCTTGATCGATGAAAAGGAATTGGTGCATTGTTTGATGGAAGGGGAAATAGGAGGTGCGGGTTTGGACGTGTTTGAGAACGAACCTAGTGTTCCAAACGAGCTTTTTGCGTTAGATAACGTTGTTTTGTCGCCTCATGCGGGTGCACACACCAAAGAGTCTTGCCAAGTGAAGTGTGATCTTGTGGCTGCGAGTTTAGAGGCCTTTTTTGTAAGCAACCCAAGGATTAGTGTTCAAAACGTGATTGATGAGAGGCATTTTTATCCAACTTTTGAGTGTCTTCCCGCTTCTTCAGGCGAACCTGCTTATGCTTAA 1095 0.4502 MISRQLECVGINCSYNPITYMELQPLLVLGLPSIFPAFETLNSHKYIFLKAFSSKLPLLQFLATKNVAPSSIRAILCDPRQALTADILGLLPAVGFVLTTTAGMDHIDLSECRRRGIQVVSIGSLAADDVADMAIGLLIDVLYKISANNRRVRKCVASKPLNFTMAPKLGGKRVGIVGLGSIGGEVGKRLEAFDCKVMYHSRNEKPFVPYHYYSNVVDLATNCDALVVCCPLTKQTRHIINREVMLALGKDGVIVNVGRGPLIDEKELVHCLMEGEIGGAGLDVFENEPSVPNELFALDNVVLSPHAGAHTKESCQVKCDLVAASLEAFFVSNPRISVQNVIDERHFYPTFECLPASSGEPAYA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02147 364 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 136 308 IPR006140 GO:0051287
Cca01g02147 364 CDD HPPR 24 330 - -
Cca01g02147 364 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 71 153 - -
Cca01g02147 364 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 22 337 - -
Cca01g02147 364 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 174 201 IPR029752 -
Cca01g02147 364 Gene3D - 70 333 - -
Cca01g02147 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 128 309 IPR036291 -
Cca01g02147 364 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 72 334 IPR006139 GO:0016616|GO:0051287
Cca01g02147 364 Gene3D - 127 311 - -
Cca01g02147 364 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 22 337 - -
Cca01g02147 364 Coils Coil 363 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02147 Cca-Chr1 49183070 49186438 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02147 - K15919 lang:109340199 415.616