Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02145 ATGACGTGTAGCTATTACAGGAAAGTGACACGTGAGACTACAGAAGATCTCAAAAAAGCAACAAAGCGAAAACCTGATTCAAGAACTCTCTATCTCATCGATCATCATCCTAAACCACTCACAAGTCACAACACTAAACTTCCATCAATGGCAGACCAAAACAACCTCAATAGCAACGAGCAACAACATGACCTTAATCTCCCCAAAGTCCTCATTCACGGTCCACAAGGATTCTCCTCTGTTCTCCAACCACCCTTTTCCCAAAACTTTCACATTCTAAACCACTCTTCGCTTCCCCTACACCAATTCCTCGCCACCCACACCCACCACTGCTCCTCCGTCGCGGCCCTCCTCTGCGACGGCGGCTACCCCGTCACCGCCGACGTGCTCCGCCTCCTCCCCTCGCTTCGTCTCGTCGTCACCGCCAGCGCCGGCACCGAGCACGTTGACTTGGACGAGTCCCGCCGCCGTGGAGTCAGGGTCGCCGGCGCCGGAAACATGTTCTCCGAGGACGTCGCCGACTTGGCGGTGGCGCTCTTGATTGACGTCGTCATGAAGATTTCCGCCGCGGATCGGTGTCTCAGAAAACGGGTTCCGCTTGGTTCAACGGGTTTTCCACTTGCTTCTAAGTTGGCAGGAAAGAAAGTTGGAATTGTTGGTTTGGGGAAAATTGGCTTAGAAGTGGCACAAAGGCTGGAAGCCTTGGATTGTATTATATCATACAACTCTAGGACCCAAAAGCCCTTAGTTTGGTACCCTTTCTACTCTAGCGTTGTTGAGTTAGCCAGCAACAACCAGGTGATCATTCTGTGTTGTGCTCTGAATGAGCAAACGAGGCACGTGATCAACAGAGAAGTGATGTTGGCACTGGGAAAAGGAGGAGTCATTGTGAACGTGGCAAGAGGGGCTTTGATAGATGAAAAGGAATTGTTGAGGTGTTTGGTGGAAGGGGAAATTGGAGGGGCTGGTTTGGATGTGTTTCAGAATGAACCTCTTGTTTGTCAACAGTTTTTTGGGTTGGATAATGTGGTTTTATCACCACATGCAGGTTTCTCCACGTCAGAGTCTTATCTTGGTATTTGCCAACTTGTGGGCCGCAATTTGGAAGCTTTTTTCTCAAATAACACTCTCATTACTCCAGTTATATAG 1149 0.4943 MTCSYYRKVTRETTEDLKKATKRKPDSRTLYLIDHHPKPLTSHNTKLPSMADQNNLNSNEQQHDLNLPKVLIHGPQGFSSVLQPPFSQNFHILNHSSLPLHQFLATHTHHCSSVAALLCDGGYPVTADVLRLLPSLRLVVTASAGTEHVDLDESRRRGVRVAGAGNMFSEDVADLAVALLIDVVMKISAADRCLRKRVPLGSTGFPLASKLAGKKVGIVGLGKIGLEVAQRLEALDCIISYNSRTQKPLVWYPFYSSVVELASNNQVIILCCALNEQTRHVINREVMLALGKGGVIVNVARGALIDEKELLRCLVEGEIGGAGLDVFQNEPLVCQQFFGLDNVVLSPHAGFSTSESYLGICQLVGRNLEAFFSNNTLITPVI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02145 382 Gene3D - 97 375 - -
Cca01g02145 382 CDD HPPR 68 373 - -
Cca01g02145 382 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 177 350 IPR006140 GO:0051287
Cca01g02145 382 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 351 IPR036291 -
Cca01g02145 382 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 68 196 - -
Cca01g02145 382 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 111 381 IPR006139 GO:0016616|GO:0051287
Cca01g02145 382 Gene3D - 169 353 - -
Cca01g02145 382 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 62 381 - -
Cca01g02145 382 PANTHER GLYOXYLATE/HYDROXYPYRUVATE REDUCTASE HPR3 62 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02145 Cca-Chr1 49159226 49162790 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02145 - K15919 gmx:100777313 512.301