Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02144 ATGAACGGCGGTGGAGGTGACTTGACGCCGCCGCCGGCTAACGGCGGCGAGTTCCTCCTCTCTCTAATCCAACGCCCCCACTCCAACCCCCACCCGCGGCCGCAGTCGCCGGCGATAGATCCGGCCGTCGCCCTCATCGGCCCCACGATCCCCGTCGGCGCTCGGCCGTGGCCAATCGCCGGCGCTGATCAGGCGCACCAGCACAACCACCCCCTCCACCATCTTCCTCCATGGTCCCACACTCTCTCTTCTCCGCTTTACCCTCCGAACTTCTTCGGGTTGCCCCATAACCCGTTTCCCCCTCCTCGGACCCACTTCCCTGCCGTCACTCCTAACGCCGTCACTAACGGCGCTAGCCTCACACACGATCTGCGGAAATTAGGGTTTCCGATTGAAGAAAACACCGCTCACGCCCACACCCAAACCCACACCAATAACAGTAACAAAGTCAATGCTTTCGTTCAGCAGCAGGAACTGAAGCTTCAGTTTGGGTCTTTGCCCACTGTTGCTTATTCCGCCGCCGAAGTTTCCTCCAATGGGGACTCGTTGCTCAATTTGAAGTTCAACAACAGAGGGTATGACGGCTACGATGGGAGCCTGCACGTGGACCACCCCAATTCGAATTCGAGTGGGAATGTGGTTGTTCAGGGTAATCATGATGTTGTGGAGAAGGAAAGAAGAGGGCTTGGGGGTTATAGGACTAGTGGGTCGTTTTCCTCTGAGAGGGTTCCACCGGGGTTTGCGAACAAGAATAGGGGGAAGGGTTTGGAGGGTAGTAGGAGGGATAGGGTCGGTGAAATGGGTGGTGGTAGGAATGAGAATTTGTATGGTAAGAGGGAAGGTGTGAGAATGGTGTCTGGCGAAAGGAGCAATGTTAAGGGCAATGTGGTGCGTGAAATGGGGTTTGTTGATCAGCTTGATCACGCCGGGATTAACCTCCATTCGGTGAATGAGACTGTGATTGGTGAAGTTGGTGTTAGGGATAGTAAGCATAAGGGAGGTGGGGGGTTAAGGGTGGAGGGTGTTCCTCAGTCTGGTGGAAGTGGTGCTGATGCTGATGTCCTTGGGGAGCAGTTAGCTGATTCCTTGGTTGTAGAGGATGAATCTGATGACAGGTCTAACTCGAAGCAACGCCGCGGACCTCGGGAGAAGGATGCTAGATCATTGGACTCAAGAGGACAGCATCTCCTGAGTCAGCGGGCAAGGATGTACAAGAGGCAGATGATGTGTAGAAGGGACATAGATGTTCATAATGTTCCTTTCCTTGCAATATACGAGTCTCTAATACCTCCTGAAGAAGAAAAGCTGAAGCAAAAGCAGCTAGTGGCATTGTTGGAGAAATTAGTCAGCAAGGAATGGCCAACAGCTAAACTTTTTCTCTATGGATCATGTGCCAACTCGTTTGGGGTTTCTAAAAGTGACATTGATGTTTGCCTTGCTATTGAGGAAGCAGACATGGACAAATCTAAGATTATAATGAAATTGGCAGATATTTTGCAATCAGATAATCTGCAGAATGTGCAGGCATTAACAAGAGCACGGGTTCCCATAGTAAAGCTCATGGATCCAGTGACAGGAATCTCTTGTGATATATGCATTAACAATCTCCTGGCTGTTGTGAATACTAAGCTTCTTCGGGATTATGCACGCATAGATGCAAGGCTAAGGCAGCTGGCTTTTATTATTAAACATTGGGCAAAGTCAAGAGGAGTCAATGAAACTTACCATGGGACATTATCTAGCTATGCGTATGTTTTGATGTGCATTCATTATTTACAAATGCGAAGACCTGCTATCCTTCCATGCTTACAGGAGATGGAGACAACCTATTCTGTAACTGTGGATGATATTAATTGTGCTTACTTTGATCAAGTTGAAAAACTTGGTGATTTCGGTCACCATAACAATGAGACAATTGCTCAACTTGTGTGGGGATTTTTCTATTATTGGGCATATTGTCATGATTATGCAAATGCCGTTATATCTGTACGCGCAGGAAGCATAATCAGCAAGCGAGAGAAGGACTGGACAAGAAGGATTGGTAATGATCGGCATTTGATATGTATAGAGGATCCTTTTGAAACATCTCATGATCTTGGACGAGTGGTAGATAAACATAGCATCAAAGTTCTGAGGGAAGAGTTTGAACGTGCTGCTGAAATCATGCAGTTTGATCCAAATCCATGTATTAAACTTTTTGAGCCTCATGTTCCTAGTTGA 2220 0.4815 MNGGGGDLTPPPANGGEFLLSLIQRPHSNPHPRPQSPAIDPAVALIGPTIPVGARPWPIAGADQAHQHNHPLHHLPPWSHTLSSPLYPPNFFGLPHNPFPPPRTHFPAVTPNAVTNGASLTHDLRKLGFPIEENTAHAHTQTHTNNSNKVNAFVQQQELKLQFGSLPTVAYSAAEVSSNGDSLLNLKFNNRGYDGYDGSLHVDHPNSNSSGNVVVQGNHDVVEKERRGLGGYRTSGSFSSERVPPGFANKNRGKGLEGSRRDRVGEMGGGRNENLYGKREGVRMVSGERSNVKGNVVREMGFVDQLDHAGINLHSVNETVIGEVGVRDSKHKGGGGLRVEGVPQSGGSGADADVLGEQLADSLVVEDESDDRSNSKQRRGPREKDARSLDSRGQHLLSQRARMYKRQMMCRRDIDVHNVPFLAIYESLIPPEEEKLKQKQLVALLEKLVSKEWPTAKLFLYGSCANSFGVSKSDIDVCLAIEEADMDKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYARIDARLRQLAFIIKHWAKSRGVNETYHGTLSSYAYVLMCIHYLQMRRPAILPCLQEMETTYSVTVDDINCAYFDQVEKLGDFGHHNNETIAQLVWGFFYYWAYCHDYANAVISVRAGSIISKREKDWTRRIGNDRHLICIEDPFETSHDLGRVVDKHSIKVLREEFERAAEIMQFDPNPCIKLFEPHVPS 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02144 739 Pfam Cid1 family poly A polymerase 639 697 IPR002058 -
Cca01g02144 739 SUPERFAMILY Nucleotidyltransferase 423 549 IPR043519 -
Cca01g02144 739 MobiDBLite consensus disorder prediction 254 268 - -
Cca01g02144 739 MobiDBLite consensus disorder prediction 326 392 - -
Cca01g02144 739 PANTHER UTP:RNA URIDYLYLTRANSFERASE 1 61 738 - -
Cca01g02144 739 MobiDBLite consensus disorder prediction 365 391 - -
Cca01g02144 739 CDD NT_PAP_TUTase 439 549 - -
Cca01g02144 739 SUPERFAMILY PAP/OAS1 substrate-binding domain 554 723 - -
Cca01g02144 739 PANTHER POLY A POLYMERASE CID PAP -RELATED 61 738 - -
Cca01g02144 739 Gene3D Beta Polymerase, domain 2 438 551 IPR043519 -
Cca01g02144 739 Pfam TUTase nucleotidyltransferase domain 433 531 IPR045100 GO:0016779
Cca01g02144 739 Gene3D - 552 720 - -
Cca01g02144 739 MobiDBLite consensus disorder prediction 229 275 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02144 - - gmx:100812787 1111.67