Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02124 ATGTGTTCTTTTTCTTCAGAACAACCACCATATGCTCCTCTTGCTTTTGCCCTTCACCGTAGTCCATGGCCCTCCAAGAGACAGCACCAGCACCTTCGCTTGAGCCTCCATAAAAGAAGGAGAGCGCAATTGCAAGAAGCAAGGAGGAAAAAGATGATTGTGTTGAAGACAGAAATCAAGATGAGAAACTTGAAGTTGTATATGGAGAACCAAAGCATCATAGAGGAGAATGAGAAGTTGAGGAAGCAAGCAGTGCTTCTTCACAAAGAGAATCAGGCCCTCTTGCTTCAACTCCAAAAGAAGTTTTCTGAACAAAATAACAGCAAAACCAATTAA 336 0.4226 MCSFSSEQPPYAPLAFALHRSPWPSKRQHQHLRLSLHKRRRAQLQEARRKKMIVLKTEIKMRNLKLYMENQSIIEENEKLRKQAVLLHKENQALLLQLQKKFSEQNNSKTN 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02124 111 Coils Coil 70 97 - -
Cca01g02124 111 PANTHER PROTEIN LITTLE ZIPPER 4 1 110 IPR039312 -
Cca01g02124 111 PANTHER PROTEIN LITTLE ZIPPER 1 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02124 Cca-Chr1 48748539 48749836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02124 - - gmx:100800538 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g01826 07 44882602 44883915 Cca01g02124 01 48748539 48749836 PCT