Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02104 ATGCATAGATCTGGAGCTACGATGGCTTGGAACGTGTTCAAGTTCTGCACTGCTCTGCGAGGACTGGGCTCGATCATGATTCTGTTGGTTCTTGGGGTCATTGGTGTCACTTACTATGCTGTTGTTTTGACCAGCTATGTCCCTGCTTTGTATGCTGGAGGACTTGATTCTCTTGTTGCCTTGGTAGTGTTGATCTTGTTTCACAGCTTGTTGGTTATGCTGTTGTGGAGTTACTTCTCTGTTGTTTTTACCGATCCGGGGAGTGTCCCACCAAACTGGAGACCTACAATTGATGAGGAAAGAGGAGAGGCTGATCCGTTAGTTGGGACAGAGTTTAGTAATGTGCAGTCTGATCCCAGTCAACGGATTCGGTACTGTCGGAAGTGCAACCAGCTAAAGCCACCTCGATGCCATCATTGTTCAGTTTGTGGACGTTGTGTTTTGAAGATGGACCACCATTGTGTGTGGGTAGTCAACTGTGTTGGGGCTCTAAATTACAAGTATTTCCTTCTATTCTTGTTCTACACGTTTCTTGAGACAACTCTAGTGACTGCATCCCTGCTGCCACATTTCATATCATTCTTTAGTGATGGAGAAATCCCTGGAACCCCTGGCTCCCTTGCTACAACTTTTCTTGCTTTTGTTTTAAACCTGGCCTTTGCACTGAGCGTCTTGGGATTTCTCATTATGCACATATCTTTGGTGTCAGCTAATACAACCACTATTGAGGCATATGAGAAGAAAACTACTCCAAAATGGCGTTATGACCTTGGTCGTCGGAAAAATTTTGAGCAGGTTTTTGGGATGGACAAAAAATACTGGTTCATTCCTGCTTATTCAGATGAAGATATACGAAAGATGCCAGCTCTACAAGGTCTTGAGTATCCATCAAAACCTGACTTTGATTCCCAATAA 915 0.4404 MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVIGVTYYAVVLTSYVPALYAGGLDSLVALVVLILFHSLLVMLLWSYFSVVFTDPGSVPPNWRPTIDEERGEADPLVGTEFSNVQSDPSQRIRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTASLLPHFISFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHISLVSANTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKKYWFIPAYSDEDIRKMPALQGLEYPSKPDFDSQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02104 304 Pfam DHHC palmitoyltransferase 122 247 IPR001594 GO:0016409
Cca01g02104 304 ProSiteProfiles DHHC domain profile. 124 174 - -
Cca01g02104 304 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 14 298 - -
Cca01g02104 304 PANTHER S-ACYLTRANSFERASE 14 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02104 Cca-Chr1 48436865 48443228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02104 8 304 Lipid Metabolism Gene Families AT4G22750 66.555 8.92e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02104 K20028 - gmx:100819811 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02104 01 48436865 48443228 Cca01g02104 01 48436865 48443228 ECH