Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02102 ATGTCTAATTGGTCTGCTGAAAATGCCAAGAGAGCTTATCTCCAATCACTCAAAATGGCCAAAAGAGGTAAAGAACCTGATGTAGCTGAGTTCATATCTGCTCTAGCAGCTGGCAATAATGCACAACTCATGGTGGTGGCCGGAGCCAGCATGGCCGGCTCAGATGAGCCGGTCACACTTGCTCTGGCCGCAGCCGCTCACCAAACCGGTGGCCGTGTGGTGTGCATTTCTTGTGGCCAAGTTGAGTCACATGCATCAAGAAAATCCCTAGGACTTTATGGAGATTGTGTGGAGTTTGTTGTGGGAGATGTGAAAAGCCTTCTGCAAGGAGATTACAAAGGAGCTGATTTTGTGCTTGTGGATTGTGACATCACTAATACAAGGGATGTTTTTCAAGCTGCATTTAAAGGGGCCAACAAAGATGGGGCACTTGTGGTTGGATATAATGTCAAGCATAGGGCATCAAGGTGGAGACAACTAAGAGCATCGTTTTTACCTATTGGAGAAGGGTTGTTGGTGGCCAAAATAGATCCCAATGTGAAGGGTGATGATAGGGTTGTCAAAAGGAAGAGTCGTTGGATTGTTCAAGTAGATAATTGCACCGGAGAGGAACATATTTTTAGGGTCACCACTCCTCATAGGAAAGTGCAAATCGAAGTTTAA 663 0.457 MSNWSAENAKRAYLQSLKMAKRGKEPDVAEFISALAAGNNAQLMVVAGASMAGSDEPVTLALAAAAHQTGGRVVCISCGQVESHASRKSLGLYGDCVEFVVGDVKSLLQGDYKGADFVLVDCDITNTRDVFQAAFKGANKDGALVVGYNVKHRASRWRQLRASFLPIGEGLLVAKIDPNVKGDDRVVKRKSRWIVQVDNCTGEEHIFRVTTPHRKVQIEV 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02102 220 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 62 160 IPR029063 -
Cca01g02102 220 PANTHER DUF1442 FAMILY PROTEIN 1 214 IPR009902 -
Cca01g02102 220 PANTHER DUF1442 FAMILY PROTEIN 1 214 - -
Cca01g02102 220 Pfam Protein of unknown function (DUF1442) 4 208 IPR009902 -
Cca01g02102 220 Gene3D Vaccinia Virus protein VP39 3 178 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02102 Cca-Chr1 48423471 48424548 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02102 - - gmx:100783654 354.755