Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02097 ATGATGGCTGAGGATCTCGGCGTGGAGGCGAAGGAGGCAGCGGTTCGCGAGGTCGCGAAGCTGTTGCCTCTTCCGGAGCTTCTTCAGTCGATCTCATCCATCAAAGCGGATTACATTTCGCGCCAACAGGCCAATGATGCGCAGCTTAGTACAATGGTTGCTGAGCAGGTTGAGCAGTCGCAGGCAGGACTAAAATCACTCTCCTTCTCTGAGAAGACAGTAAATCAACTTCGTGATAACTTTGTCTCCATTGAAAAGTATGAATGCCAAACATTAATTGACAACCATGACCAGATAAAGCTACTTAGCAATGCAAGAAATAACTTAAACACAACTTTGAAGGATGTTGAAGGTATGATGTCTATCTCTGTTGAGGCAGCGGAGGCTCGGGACTCTTTGAGTGATGATAAAGAAATTGTCAACACTTACGAGAGGTTATCAGCTTTGGATGGAAAGCGAAGGTTTGCATTAGCAGCTGCAGCATCTCACAAGGAAGAGGTTGGAAGGCTAAGAGAATATTTTGAAGATGTAGACCGAACCTGGGAGACCTTTGAGAAAACGCTATGGGCCCACATTTCCAATTTTTATAAACTCTCTAAAGAAAGCCCACAGACTTTGGTTCGTGCTATACGGGTTGTTGAAATGCAAGAAATCCTTGATGAACAGATTGCAGAAGAAGCAGCTGAGGCTGAAGGGGATGGTGCAATGGCATCAGTTGCAAATCCTCGTAAGACCAGCATAAAATCTACAAGTTCATTGGCTTCTTCAAAAAATTTAACACAGCAAAAGATGAAGGTTCAGGGGAAAGGCTATAAAGATAAATGCTATGAGCATATAAGGAAGACTGTTGAAGGAAGGTTTAACAAGCTTCTAAATGAGCTTGTGTTCGAGGACCTGAAAGCAGCTTTAGAGGAAGCACGGGCGATTGGTGAAGAGCTTGGAGATGTCTATGACTACGTTGCTCCCTGCTTTCCTCCAAGATATGAAATATTCCAACTAATGGTAAATCTGTACACTGAGAGGTTTATTCAGATGCTCAGATTGCTTAGCGACAGGGCGAATGAATTAACAAATATTGAGATATTGAAGGTAACTGGTTGGGTGGTTGAATACCAAGATAATCTGATTGGGCTTGGAGTTGATGAGTCTTTAGCCCAAGTGTGCTCTGAGAGCGGTGCAATGGATCCTCTTATGAACTCTTATGTTGAGAGAATGCAAGCTACAACTAGGAAATGGTACTTGAATATTTTGGAGGCTGATAGAACACAGCCCCCAAAGAAAACTGAAGACGGGAAGCTATATACCCCAGCCGCTGTTGATCTGTTCAGGATACTTGGTGAGCAAGTACAAATTGTTCGGGATAATAGCACTGATCTCATGTTATACAGAATTGCCTTGGCAACGATTCAGGTGATGATTGATTTTCAAGCAGCTGAAAAGAAGAGACTTGAAGAACCAGCTTCTGAAATTGGTCTTGAACCTTTATGTGCTATGATTAACAACAATTTGCGCTGCTATGACCTTGCAATGGAATTAAGTACTAGCACCATTGAAGCCCTTCCACAGAACTATGCTGAGCAGGTTAATTTTGAAGATACCTGTAAGGGTTTTCTTGAGGTTGCTAAGGAAGCCGTACATCAAACTGTTAGTGTTATATTTGAAGATCCTGGCGTCCAGGAGTTGCTGGTCAAGCTATACCAGAAAGAATGGAGTGAGGGGCAGGTTACTGAGTACTTGGTTGCAACATTTGGTGATTATTTTGGTGATGTAAAGATGTACATTGAAGAAAGATCTTTTAGGAGATTTGTTGAAGCCTGCCTGGAAGAAACAGTGATTGTTTATGTTGATCATCTTTTAACACAGAAAAATTACATTAAAGAAGAAACTATTGAACGGATGAGGCTAGATGAGGAGGTTATCATGGACTTCTTTAGGGAGCATATCAGTGTTTCTAAAGTTGAAAACAGAGTGAGTGTGCTTAGCGACTTGAGGGAACTTGCGTCGGCAGAGAGCCTGGATACGTTTACACTCATCTATACAAATATACTTGAACATCAACCTGACTGCCCGCCTGAAGTTGTCGAGAAACTTGTTGGTCTTCGAGAAGGAATTCCTCGGAAGGATGCCAAAGAGGTTATTCAAGAGTGCAAAGAGATATACGAGAATTCACTTGTTGATGGAAGACCTCCAAAGGTAGGTTTTGTTTTCCGACGGGTGAAGTGCTTAACAGCATCTAAGGGGGGCATTTGGCGTAAACTCACTTGA 2265 0.4252 MMAEDLGVEAKEAAVREVAKLLPLPELLQSISSIKADYISRQQANDAQLSTMVAEQVEQSQAGLKSLSFSEKTVNQLRDNFVSIEKYECQTLIDNHDQIKLLSNARNNLNTTLKDVEGMMSISVEAAEARDSLSDDKEIVNTYERLSALDGKRRFALAAAASHKEEVGRLREYFEDVDRTWETFEKTLWAHISNFYKLSKESPQTLVRAIRVVEMQEILDEQIAEEAAEAEGDGAMASVANPRKTSIKSTSSLASSKNLTQQKMKVQGKGYKDKCYEHIRKTVEGRFNKLLNELVFEDLKAALEEARAIGEELGDVYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDRANELTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTRKWYLNILEADRTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDLMLYRIALATIQVMIDFQAAEKKRLEEPASEIGLEPLCAMINNNLRCYDLAMELSTSTIEALPQNYAEQVNFEDTCKGFLEVAKEAVHQTVSVIFEDPGVQELLVKLYQKEWSEGQVTEYLVATFGDYFGDVKMYIEERSFRRFVEACLEETVIVYVDHLLTQKNYIKEETIERMRLDEEVIMDFFREHISVSKVENRVSVLSDLRELASAESLDTFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVIQECKEIYENSLVDGRPPKVGFVFRRVKCLTASKGGIWRKLT 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02097 754 Gene3D - 566 732 IPR042532 -
Cca01g02097 754 PANTHER EXOCYST COMPLEX COMPONENT SEC6-RELATED 1 752 IPR010326 GO:0000145|GO:0006887
Cca01g02097 754 PANTHER BNACNNG07830D PROTEIN 1 752 - -
Cca01g02097 754 Pfam Exocyst complex component Sec6 174 738 IPR010326 GO:0000145|GO:0006887
Cca01g02097 754 Gene3D - 391 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02097 Cca-Chr1 48302357 48322977 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02097 K06110 - gmx:100799529 1393.25