Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02094 ATGTCCCAGCTGAAGCAAATGTCGCACATAGACAGTGCCCCTTCGACCCCAGGGAAGTTCAAGATGGAGAAAGCCTCGTACTTCAACCGCGTGCGGTGGCACATGTCGCTGGCGAAGCTCGCCGTGTGGTCCTTCGTCTTCTTGGCCGCAATCTTGATCTTCTTTTTCCGGTCTCCGGCGTCGTCTCCGGCGGCGGCGGACCTCTCTCGGCGGTCCCTGAGGAACTACAACTGGGGCGGTCCCGTCTGGGAGAAACGGGTCCGAGCATCCGCCCAGATCCGTTCCCGAAACGGGTACGCCGTGTTGGTCACCGGAGCCGCCGGCTTCGTCGGCACCCATGTCTCGGCGGCGTTAAAGCGCCGCGGTGACGGGGTGCTGGGAATTGACAATTTCAATGACTATTACGACCCTTCGCTGAAGCGTGCACGCCAGTCACTTCTAGAGCGCACTGGCGTGTACGTGGTGGAGGGTGATATCAATGATGAAGCACTCTTGAGAAAGCTTTTCGAGGTTGTGCCTTTCACTCATGTGATGCACTTGGCTGCTCAGGCTGGTGTGAGGTATGCTATGGAGAATCCTGGATCTTATGTGCATAGTAACATTGCTGGTTTTGTGAATTTGCTTGAGGTTTGTAAGAGTGTGAATCCCCAACCTGCTATTGTTTGGGCCTCTAGTAGCTCAGTTTATGGACTTAACACTAAGGTTCCATTTTCTGAGAGGGATAGGACTGATCAGCCTGCTAGTTTGTATGCTGCCACTAAGAAGGCTGGTGAGGAGATTGCTCACACTTATAACCATATATATGGCCTTTCATTGACTGGATTGAGATTCTTCACTGTTTATGGCCCTTGGGGTAGGCCTGATATGGCTTACTTCTTCTTCACTAGGGATATTTTGAAGGGGAAGGCCATCTCCATATTTGAGGCTGCCAATCATGGCACTGTTGCAAGGGATTTTACTTACATTGATGATATTGTGAGGGGATGCTTGGGGGCTTTGGATACGGCAGAGAAGAGCACAGGGAGTGGAGGGAAGAAGAGGGGGCCGGCGCAGTTGAGGGTGTTCAATTTGGGGAATACTTCGCCCGTGCCGGTTAGCGATCTGGTGAGCATTTTGGAGAGGCTGTTGAAGGTTAAGGCCAAGAGGAACATAATGAAGTTGCCACGGAATGGGGATGTGCAGTTTACTCATGCCAATATTAGCTATGCGCAGAGGGAGCTTGGGTACAAGCCCACCACGGATCTGCAGAGTGGTTTGAAGAAATTCGTGCGGTGGTACCTGAATTACTATTCTGGCGGGAAGAAGGCTGCTTCAGGCACCAGGCACCCTCTCTCCTGGAAAAGCCAGCATTCTTATTTTGAAGTTCTCCCCCTTTTTTGA 1380 0.5203 MSQLKQMSHIDSAPSTPGKFKMEKASYFNRVRWHMSLAKLAVWSFVFLAAILIFFFRSPASSPAAADLSRRSLRNYNWGGPVWEKRVRASAQIRSRNGYAVLVTGAAGFVGTHVSAALKRRGDGVLGIDNFNDYYDPSLKRARQSLLERTGVYVVEGDINDEALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSVNPQPAIVWASSSSVYGLNTKVPFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEAANHGTVARDFTYIDDIVRGCLGALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRNIMKLPRNGDVQFTHANISYAQRELGYKPTTDLQSGLKKFVRWYLNYYSGGKKAASGTRHPLSWKSQHSYFEVLPLF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02094 459 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 97 434 IPR036291 -
Cca01g02094 459 Gene3D - 100 432 - -
Cca01g02094 459 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 10 436 - -
Cca01g02094 459 PANTHER EPIMERASE-RELATED 10 436 - -
Cca01g02094 459 Pfam NAD dependent epimerase/dehydratase family 101 338 IPR001509 -
Cca01g02094 459 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Cca01g02094 459 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Cca01g02094 459 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Cca01g02094 459 PRINTS Nucleotide sugar epimerase signature 392 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02094 Cca-Chr1 48260648 48263185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02094 4 438 Miscellaneous Gene Families AT4G00110 87.126 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02094 K08679 - gmx:100788739 830.091