Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02091 ATGGAAGTGGGTATGCTTCCAATCTCAGCTTCAAAGAGAGGAAAACTCTTGGCTGCTGGTTACACCACACTTGATGCCATTGCTCGTGCCTCCCCCACCCACCTTGCTCGAGATATTGATGTTTCTGATAGTGAAGCCTCGGAAATTCTGAGTCTTGCAACCAAAGCTAGTAGTGCTTTGGAGAGAGAAAGACCAAATGGGACTCACACTGCtgttgttggtgGTGGACAGACTGCCTGGGATATGCTCAATGAAGAAAAATTTTCTTCTTGCATTACCACATCTTGTGTGGATCTGGACAACATCCTTGGCGGAGGAATTAAGTGCAAAGAAGTCACTGAAATAGGTGGAGTTCCAGGCATCGGTAAAACTCAAATAGGGATTCAACTTGCGGTAAATGTTCAGATTCCACAAGAATATGGTGGCCTAGGTGGGAAGGCAATATACATCGACACAGAAGGAAGCTTTATGGTTGAACGTGTTCTACAAATTGCTGAAGCATGCATAGAAGATATGGCAGAATACAGCCACCAGTTTCACAAGGATTTTCAAGCTTGTGATGTTAAAGTTCACCCTAATAATATCTTAGAAAATATATTCTATTTTCGTGTTTGCAGCTACACTGAGCAAATTGCTTTGATAAATTACTTGGACAAATTCATCATGGAGAATAAAGATGTAAAGATCATCATTGTTGACAGTGTTACTTTCCACTTCCGCCAAGATTTTGATGATATGGCTCTCAGGACTCGATTGCTCAGTGAAATGGCTTTGAAGTTGATGAAGCTTGCAAAAAAATTCTGTTTGGCTATTGTTATGTTGAATCAAGTAACAACCAAGTATGTTGAAGGTTCATTTCAGTTGACCCTTGCACTAGGAGATAGCTGGTCACATTCATGCACAAATAGGATAATCTTATTTTGGAATGGCAATGAACGGCATGCATTTATTGATAAATCCCCTTCTCTTAAATCAGCATCAGCTCCATATTCTGTGACCACTAGGGGGATACGTAATTCTACTTCAAGCAGCAAACGAATCAAGATGATGTGA 1053 0.4027 MEVGMLPISASKRGKLLAAGYTTLDAIARASPTHLARDIDVSDSEASEILSLATKASSALERERPNGTHTAVVGGGQTAWDMLNEEKFSSCITTSCVDLDNILGGGIKCKEVTEIGGVPGIGKTQIGIQLAVNVQIPQEYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMAEYSHQFHKDFQACDVKVHPNNILENIFYFRVCSYTEQIALINYLDKFIMENKDVKIIIVDSVTFHFRQDFDDMALRTRLLSEMALKLMKLAKKFCLAIVMLNQVTTKYVEGSFQLTLALGDSWSHSCTNRIILFWNGNERHAFIDKSPSLKSASAPYSVTTRGIRNSTSSSKRIKMM 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02091 350 ProSiteProfiles RecA family profile 1. 88 277 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Cca01g02091 350 Gene3D - 72 341 IPR027417 -
Cca01g02091 350 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 349 - -
Cca01g02091 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 338 IPR027417 -
Cca01g02091 350 PIRSF Rad51 1 343 IPR016467 -
Cca01g02091 350 CDD Rad51_DMC1_radA 92 338 IPR033925 GO:0003677
Cca01g02091 350 Gene3D - 14 64 - -
Cca01g02091 350 Pfam Rad51 77 339 IPR013632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02091 Cca-Chr1 48229044 48233007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02091 K10870 - gmx:100527406 573.548