Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02089 atgtcaattatagcacgcagaggcatccgttcaatgccaagtctaaatgctgcaaaagtatctactgctttactagagaaaggccaaagtcgtgtcatagatgcttcacttactcttattcgagaaagagcaaagcttaagggagaacttgtgcgtgctttgggaggtgctaaagcaacttcaactcttcttggagttcctttgggacataattcatctttccttcaaggtcctgcatttgctccacctcgcattagggaggccatttggtgtggtagtacaaactcaacaactgaagaaggcaaggaattacaagatgctcgagtgctaactgatgttggtgatgtccctatccaagaaattcgagattgtggggtagatgatcacagattaatgaatgtaattggtgaatctgtaaagttagtaatggatgagGATCCATTACGCCCCTTAGTTTTAGGTGGTGATCACTCAATATCATTTCCAGTTATCAGAGCTGTCTCTGAGAAGCTTGGAGGACCCGTTGATGTTCTTCATCTTGATGCACATCCGGATAACTATGATGCATTTGAAGGAAACATTTATTCTCATGCTTCTTCTTTTGCTCGAGTGATGGAGGGTGACTATGTTCGACGACTCTTGCAGGTTGGTATAAGATCAATAACAGCTGAAGGGCGTGCACAAGCCAAAAAATTTGGTGTTGAGCAATACGAAATGCGAACATTTTCAAGAGATCGCCACTTTTTAGAGAACCTGAAACTTGGGGAAGGTGTTAAAGGTGTTTATATCTCAATAGATGTGGATTGCCTAGATCCTGCCTTTGCTCCAGGAGTGTCTCACATAGAGCCAGGAGGTCTTTCTTTCCGCGATGTTCTCAACATCCTGCACAATCTTCAAGGCGATGTTGTTGCTGGAGATGTGGTCGAACTCAACCCGCAACGAGATACCGTTGATGGAATGACTGCCATGGTAGCTGCTAAGCTGGTGAGAGAACTGGCTGCAAAAATTTCTAAGTGA 1017 0.2537 MSIIARRGIRSMPSLNAAKVSTALLEKGQSRVIDASLTLIRERAKLKGELVRALGGAKATSTLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELQDARVLTDVGDVPIQEIRDCGVDDHRLMNVIGESVKLVMDEDPLRPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDNYDAFEGNIYSHASSFARVMEGDYVRRLLQVGIRSITAEGRAQAKKFGVEQYEMRTFSRDRHFLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVAGDVVELNPQRDTVDGMTAMVAAKLVRELAAKISK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02089 338 Gene3D Ureohydrolase domain 48 338 - -
Cca01g02089 338 ProSiteProfiles Arginase family profile. 52 338 IPR006035 GO:0046872
Cca01g02089 338 PANTHER ARGINASE/AGMATINASE 4 338 IPR006035 GO:0046872
Cca01g02089 338 SUPERFAMILY Arginase/deacetylase 58 334 IPR023696 -
Cca01g02089 338 PIRSF Arginase 51 338 IPR006035 GO:0046872
Cca01g02089 338 ProSitePatterns Arginase family signature. 264 285 IPR020855 GO:0016813|GO:0046872
Cca01g02089 338 Pfam Arginase family 62 332 IPR006035 GO:0046872
Cca01g02089 338 CDD Agmatinase-like_2 63 333 - -
Cca01g02089 338 PANTHER ARGINASE 2, CHLOROPLASTIC/MITOCHONDRIAL 4 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02089 Cca-Chr1 48198533 48203523 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02089 K01476 - gmx:100789799 645.195