Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02088 ATGTCATCATCTCTTCTCCCTCTCCGCAACACACCACCATCACTCCTCCATTTTCTCCCTTCAACCCCTCTTCCATTCCAACCACAACCCATGTCCACTTTCTCTACTTCCCTCTCTCCCTCCACATCCACATCCACCTCTCAAAACAACCTCGACCAGCCCGAGCACAACCTCTCCCACGTCCTCAAATACCACAACCAAACCAAACACAACTTCAACCGCTACGCACGGGGCCCCCACGGGCTCGACTGGGCCAACCAGCCCAACCCATTCCGCAGGTAcctctcctcccctctcctccccctcctccaccCGCAACCAAACGCACACCAATCACCACTCTACCACTCTCTCTTCCGTTCTCTCCCCTCTCCGCACCCCATTTCCGAATCCACCGTTTCCCACTTCCTCTTCGATTCCCTCGCTCTCTCCGCCTGGAAAACCACCGGCTTCTCCACCTGGTCTCTCAGGGTCAACCCCAGTAGCGGCAATTTGCACCCCACTGAAGCCTACGTCGTTGCCCCACCGATACCCTCCATCTCCGATTCGCCTTTCGTCGCTCATTATGCCCCAAAGGAGCATTCTTTGGAGCTCAGAGCCAAAATCCCATCTGGGTTTTTCCCCAAGTTTTTTCCACCCAATTCGTTTCTCGTTGGGTTGTCCTCGGTTTTCTGGCGCGAGGCTTGGAAGTACGGTGAACGAGCGTTCAGGTACTGTAACCATGACGTTGGTCATGCCATTGGTGCAGTTGCCATGGCTGCTGCGGGTCTTGGTTGGGATGTGAAGGTTTTGGATTCTCTGGGGTGTGAGGAGTTGAAGAGTCTCATGGGGCTTCATGTTTTCCCAGAGTTTGAGATTCCATCACGTGCTGTTAGAGGGAAGATTCCAGAGATTGAGTTTGAGCATCCTGATTGTGTGATGCTAGTTTATCCAAGTGGGGTTGGTGGGTTTGATGTGGATTGGAAGGAGTTAAGTGAAGCTATATTGGGGTTTGATGAGTTGGAGTGGAAAGGGAAGCCTAATTCCCTTAGCAAAGAGCATGTGTGTTGGGATCTTATTTATAGGACTGCTGAGGCTGTGAAGAAGCCTTTGACATTGGACGATAGGTTCTCGGTTGAGCCTTTTCAGAGGAGTGGTGTTTGTGGTGAGGGTTTCTATAAGGGGTTAACTGTGAGGGAAGTTGTTAGGAAGCGTAGGAGTGCTGTTGATATGGATGAAGTAACTAGAATTGAGAGAGATGCATTTTATCAGATTCTGTTGCATTGTCTTCCTTCAGGTTGCCAGGTTGGAGGAAGGCAAAAGAGGCAGCTGGCATTGCCATTCCGTGCGCTTCCATGGGATGCCGAGGTGCATGCTGCTTTGTTTGTTCATAGAGTGGAGGGGTTGCCGCAAGGATTGTATTTCTTGGTGAGGAATGAAAATCATTTTGATGAATTGAAGAAGGCTATGCTCCCTGACTTTTTGTGGACCAAACCTGAGGGCTGCCCTGATGAGCTTCCGCTGTATGAACTGCTTAGATCTGATTGCCTGAAGCTTGCCAAGCAGCTTTCATGTCACCAGGACATTGCAAGTGATGGTTGCTTCAGCCTTGGTATGTTGGCTCGAATGGAACCTACTTTGCGTGAGAAGAATGCTTGGATGTATCCACGTTTATTTTGGGAGACTGGAGTCCTTGGACAGGTGCTGTACCTTGAAGCACATGCTGTTGGAATCTCAGCAACTGGAATTGGTTGCTTCTTTGATGACCCTGTTCATCAGTTGCTTGGGTTGAAAGGGTCAGCATTTCAGAGTCTCTATCATTTTACTGTTGGAGGTCCTGTCTTGGACAAGCGTATAATGAGTTTGCCAGCATATCCAGGCCCTGATGTTGATGCTTAA 1878 0.4888 MSSSLLPLRNTPPSLLHFLPSTPLPFQPQPMSTFSTSLSPSTSTSTSQNNLDQPEHNLSHVLKYHNQTKHNFNRYARGPHGLDWANQPNPFRRYLSSPLLPLLHPQPNAHQSPLYHSLFRSLPSPHPISESTVSHFLFDSLALSAWKTTGFSTWSLRVNPSSGNLHPTEAYVVAPPIPSISDSPFVAHYAPKEHSLELRAKIPSGFFPKFFPPNSFLVGLSSVFWREAWKYGERAFRYCNHDVGHAIGAVAMAAAGLGWDVKVLDSLGCEELKSLMGLHVFPEFEIPSRAVRGKIPEIEFEHPDCVMLVYPSGVGGFDVDWKELSEAILGFDELEWKGKPNSLSKEHVCWDLIYRTAEAVKKPLTLDDRFSVEPFQRSGVCGEGFYKGLTVREVVRKRRSAVDMDEVTRIERDAFYQILLHCLPSGCQVGGRQKRQLALPFRALPWDAEVHAALFVHRVEGLPQGLYFLVRNENHFDELKKAMLPDFLWTKPEGCPDELPLYELLRSDCLKLAKQLSCHQDIASDGCFSLGMLARMEPTLREKNAWMYPRLFWETGVLGQVLYLEAHAVGISATGIGCFFDDPVHQLLGLKGSAFQSLYHFTVGGPVLDKRIMSLPAYPGPDVDA 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02088 625 SUPERFAMILY FMN-dependent nitroreductase-like 468 609 IPR000415 GO:0016491
Cca01g02088 625 CDD McbC_SagB-like_oxidoreductase 389 605 - -
Cca01g02088 625 MobiDBLite consensus disorder prediction 29 53 - -
Cca01g02088 625 Gene3D NADH Oxidase 383 606 IPR000415 GO:0016491
Cca01g02088 625 CDD McbC_SagB-like_oxidoreductase 138 288 - -
Cca01g02088 625 SUPERFAMILY FMN-dependent nitroreductase-like 157 278 IPR000415 GO:0016491
Cca01g02088 625 Gene3D NADH Oxidase 81 294 IPR000415 GO:0016491
Cca01g02088 625 PANTHER - 44 625 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02088 - - gmx:100791269 1102.81