Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02087 ATGTTATTTGCAACTAGGATGGCACCCTCCAGTTGTATGACTAGTGCCAAAGTTAAATCTCTTGATTACATCGGTTCAGGTGTTTCTAAAGTTGGTATTGCTGCATTCCTTTACAAAACCATGTTTGGCCAGAAGCAATGCTCTCCATGCTTCTCCAGTTTTGCTCAACCTTGTTTAACTGTCAATTTCAAGAGGATGACTTGGTCAGTTAGGAGCAGCATAAATGACAGCAGTTTTAGTCCTTCCACTTCAAATGGCACTAATGGAAGGACACGCATAATTAGAGTGATTCAAGAGTTTCAGACCAAGTTAGGTTCTAAAATTCAGGAGGTAAAGAAAAATCTTCCAATGAAGCTGCTTTTCTTCTTGGTTGGATTTTATTGTGCAACGGCCTTTGCCACTGTTATTGGACAAACTGGTGACTGGGATATTCTATCTGCTGCCTTGGCTGTGGCTGTTGTGGAAGGCATTGGGGCTCTCATGTACAATGCTTCTATTCCTTTACTTAGCAAGAACAGGAGCCTTATTTCCGTGTTTAATTATTGGAAGGCTGGCCTTACACTGGGACTTTTCTTAGATTCCTTCAAATATTGA 594 0.4091 MLFATRMAPSSCMTSAKVKSLDYIGSGVSKVGIAAFLYKTMFGQKQCSPCFSSFAQPCLTVNFKRMTWSVRSSINDSSFSPSTSNGTNGRTRIIRVIQEFQTKLGSKIQEVKKNLPMKLLFFLVGFYCATAFATVIGQTGDWDILSAALAVAVVEGIGALMYNASIPLLSKNRSLISVFNYWKAGLTLGLFLDSFKY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02087 197 Pfam Protein of unknown function (DUF565) 138 196 IPR007572 -
Cca01g02087 197 PANTHER - 9 197 IPR007572 -
Cca01g02087 197 PANTHER YCF20-LIKE PROTEIN 9 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02087 Cca-Chr1 48179160 48181977 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02087 - - gmx:100306594 351.673