Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02084 ATGCTACCTACTGGAGCCAAGGAGAACCAATTACGTGAGAGCAACAGTCAAAAGGTCCATCCTCAACCCATGGAAGAGGCCATGAATCAGAATCCAGAAGCAATGGAAACCCTAATATCTAAGATTTTTACGAATATCTCTTCCTTGAAGTCAGCTTATATCCAGCTACAAGCTGCTCATACTCCCTATGACCCTGATAAAATCCACTCTGCTGATAAACTTGTTATTAGTGAGCTGAAAAATCTGTCTGAACTCAAGCATTTCTACAGGGAGAACAACCCAAAACCAGTGTGTGTTTCTCCCCAGGACTCACGTTTAGCTGCAGAAATTCAAGAACAACAGAGCCTTCTTAAAACTTATGAGGTCATGGTGAAGAAATTCCAATCTGAAATCCAGAATAAAGATTCAGAGATTCATCAATTGCAGCAGCAGATTGAAGAAGCTAGCCAGAAGCGAGCAAAACTAGAGAAAAATCTGAAGCTTAGAGGTTTGTCAACCAAGGAATCAGAAGAGGAAACTGGCTTTTTCCCTCTTGATCTAACTCCAGATCTCTTCACCTCTGCTGTGGAAGCAGCTGCAAAAGCCATCCATGATTTTTCTAAACCTCTGATCAACATGATGAAAGCAGCTGGGTGGGACCTTGATGCTGCTGCCAACTCAATCGAACCTGATGTTGTTTACGCAAAGAGAGCTCATAAGAAATATGCATTTGAGTCTTACATATGCCAAAGAATGTTCAGCGGCTTTGAGCAGGAAAGCTTCTCTGTCAAATCAGACAATATTACTGTAACTAAAGAGAGCTTCTTCCATCAATTTCTTGCTTTGAGAGAGATGGATCCCTTAGACATGCTAGGGCAAAATCCGGATTCCATTTTTGGGAAATTTTGCAGGAGCAAATACTTGGTGGTAGTTCATCCAAAGATGGAGGCATCATTCTTTGGAAATTTAGATCAGCGAAATTATGTTATGGGTGGAGGGCATCCAAGGACTCCTTTTTACCAGGCTTTTCTTAAACTGACCAAGTCAATTTGGCTTTTACACAGATTGGCTTATTCTTTTGAGCCAAATGTTAAGGTATATCAGGTCAAAGGAGGGAGTGAGTTCTCTGATGTTTATATGGAAAGTGTGGTCAAGAATCTAATAATGGATGACAATGATGAAAAACCCAAAGTTGGTTTGATGGTTATGCCTGGATTTTGGATTGGTGGAAGTGTGATTCAAAGTAAAGTCTACCTCTCTGGTATGAAGGTCGCTGAATGA 1260 0.4087 MLPTGAKENQLRESNSQKVHPQPMEEAMNQNPEAMETLISKIFTNISSLKSAYIQLQAAHTPYDPDKIHSADKLVISELKNLSELKHFYRENNPKPVCVSPQDSRLAAEIQEQQSLLKTYEVMVKKFQSEIQNKDSEIHQLQQQIEEASQKRAKLEKNLKLRGLSTKESEEETGFFPLDLTPDLFTSAVEAAAKAIHDFSKPLINMMKAAGWDLDAAANSIEPDVVYAKRAHKKYAFESYICQRMFSGFEQESFSVKSDNITVTKESFFHQFLALREMDPLDMLGQNPDSIFGKFCRSKYLVVVHPKMEASFFGNLDQRNYVMGGGHPRTPFYQAFLKLTKSIWLLHRLAYSFEPNVKVYQVKGGSEFSDVYMESVVKNLIMDDNDEKPKVGLMVMPGFWIGGSVIQSKVYLSGMKVAE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02084 419 Coils Coil 110 158 - -
Cca01g02084 419 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 414 IPR040225 GO:0009639|GO:0009959
Cca01g02084 419 MobiDBLite consensus disorder prediction 8 24 - -
Cca01g02084 419 MobiDBLite consensus disorder prediction 1 25 - -
Cca01g02084 419 PANTHER MYOSIN-4 PROTEIN (DUF641)-RELATED 1 414 - -
Cca01g02084 419 Pfam Plant protein of unknown function (DUF641) 31 157 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02084 Cca-Chr1 48163041 48164300 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02084 - - gmx:100499972 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02084 01 48163041 48164300 Cca01g02084 01 48163041 48164300 ECH